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Cluster: A46.bin_5_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A46_contig_840 A46_contig_840_259 292932 293885 + GT2
pfam A46_contig_840 A46_contig_840_260 293869 295578 + DUF6020
NULL(UNKNOWN) A46_contig_840 A46_contig_840_261 295612 298095 + NULL(UNKNOWN)
[View Structural Homologs]
TC A46_contig_840 A46_contig_840_262 298079 299938 + 9.B.18.2.1
pfam A46_contig_840 A46_contig_840_263 299952 300338 + Glyoxalase_4
STP A46_contig_840 A46_contig_840_264 300595 301725 + Aminotran_1_2
TC A46_contig_840 A46_contig_840_265 301730 302371 + 9.B.18.1.3
pfam A46_contig_840 A46_contig_840_266 302384 303355 + ATP-grasp_3 | ATPgrasp_Ter | PylC-like_N
CAZyme A46_contig_840 A46_contig_840_267 303391 304518 + GT4
Gene ID: A46_contig_840_259
Type: CAZyme
Location: 292932 - 293885 (+)
Gene ID: A46_contig_840_260
Type: pfam
Location: 293869 - 295578 (+)
Gene ID: A46_contig_840_261
Type:
Location: 295612 - 298095 (+)
Gene ID: A46_contig_840_262
Type: TC
Location: 298079 - 299938 (+)
Gene ID: A46_contig_840_263
Type: pfam
Location: 299952 - 300338 (+)
Gene ID: A46_contig_840_264
Type: STP
Location: 300595 - 301725 (+)
Gene ID: A46_contig_840_265
Type: TC
Location: 301730 - 302371 (+)
Gene ID: A46_contig_840_266
Type: pfam
Location: 302384 - 303355 (+)
Gene ID: A46_contig_840_267
Type: CAZyme
Location: 303391 - 304518 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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