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Cluster: A46.bin_5_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A46_contig_66 A46_contig_66_465 545304 546242 + 3.A.1.1.10
TC A46_contig_66 A46_contig_66_466 546264 547190 + 3.A.1.1.29
pfam A46_contig_66 A46_contig_66_467 547275 548948 + DUF3502
CAZyme A46_contig_66 A46_contig_66_468 549109 550875 + GH35
TC A46_contig_66 A46_contig_66_469 551362 552624 + 2.A.1.31.2
TF A46_contig_66 A46_contig_66_470 552656 553723 + HTH_5
CAZyme A46_contig_66 A46_contig_66_471 553909 555984 + GH154
CAZyme A46_contig_66 A46_contig_66_472 555998 558010 + GH50
TC A46_contig_66 A46_contig_66_473 558104 559543 - 2.A.38.1.1
TC A46_contig_66 A46_contig_66_474 559555 560913 - 2.A.38.1.1
Gene ID: A46_contig_66_465
Type: TC
Location: 545304 - 546242 (+)
Gene ID: A46_contig_66_466
Type: TC
Location: 546264 - 547190 (+)
Gene ID: A46_contig_66_467
Type: pfam
Location: 547275 - 548948 (+)
Gene ID: A46_contig_66_468
Type: CAZyme
Location: 549109 - 550875 (+)
Gene ID: A46_contig_66_469
Type: TC
Location: 551362 - 552624 (+)
Gene ID: A46_contig_66_470
Type: TF
Location: 552656 - 553723 (+)
Gene ID: A46_contig_66_471
Type: CAZyme
Location: 553909 - 555984 (+)
Gene ID: A46_contig_66_472
Type: CAZyme
Location: 555998 - 558010 (+)
Gene ID: A46_contig_66_473
Type: TC
Location: 558104 - 559543 (-)
Gene ID: A46_contig_66_474
Type: TC
Location: 559555 - 560913 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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