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Cluster: A46.bin_5_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A46_contig_66 A46_contig_66_235 288842 291160 + 3.A.11.2.1
pfam A46_contig_66 A46_contig_66_236 291292 293061 + tRNA-synt_1d | Arg_tRNA_synt_N | DALR_1
NULL(UNKNOWN) A46_contig_66 A46_contig_66_237 293294 294283 + NULL(UNKNOWN)
[View Structural Homologs]
TC A46_contig_66 A46_contig_66_238 294302 296014 + 9.B.33.1.1
TF A46_contig_66 A46_contig_66_239 296023 297654 + HTH_AraC
TC A46_contig_66 A46_contig_66_240 297740 298660 + 3.A.1.1.9
TC A46_contig_66 A46_contig_66_241 298676 299572 + 3.A.1.1.9
STP A46_contig_66 A46_contig_66_242 299632 301335 + SBP_bac_1
CAZyme A46_contig_66 A46_contig_66_243 301341 302759 + GH32
CAZyme A46_contig_66 A46_contig_66_244 302939 303940 + GH172
CAZyme A46_contig_66 A46_contig_66_245 303972 305444 + GH32
Gene ID: A46_contig_66_235
Type: TC
Location: 288842 - 291160 (+)
Gene ID: A46_contig_66_236
Type: pfam
Location: 291292 - 293061 (+)
Gene ID: A46_contig_66_237
Type:
Location: 293294 - 294283 (+)
Gene ID: A46_contig_66_238
Type: TC
Location: 294302 - 296014 (+)
Gene ID: A46_contig_66_239
Type: TF
Location: 296023 - 297654 (+)
Gene ID: A46_contig_66_240
Type: TC
Location: 297740 - 298660 (+)
Gene ID: A46_contig_66_241
Type: TC
Location: 298676 - 299572 (+)
Gene ID: A46_contig_66_242
Type: STP
Location: 299632 - 301335 (+)
Gene ID: A46_contig_66_243
Type: CAZyme
Location: 301341 - 302759 (+)
Gene ID: A46_contig_66_244
Type: CAZyme
Location: 302939 - 303940 (+)
Gene ID: A46_contig_66_245
Type: CAZyme
Location: 303972 - 305444 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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