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Cluster: A46.bin_5_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A46_contig_66 A46_contig_66_204 251677 252498 - CE4
peptidase A46_contig_66 A46_contig_66_205 252727 254544 + G05.UPW
NULL(UNKNOWN) A46_contig_66 A46_contig_66_206 254581 255102 + NULL(UNKNOWN)
[View Structural Homologs]
TC A46_contig_66 A46_contig_66_207 255227 256195 + 9.B.34.1.1
STP A46_contig_66 A46_contig_66_208 256227 257984 + HATPase_c
TF A46_contig_66 A46_contig_66_209 257962 258951 + HTH_AraC | HTH_AraC
TC A46_contig_66 A46_contig_66_210 259095 259985 + 3.A.1.1.9
TC A46_contig_66 A46_contig_66_211 260012 260896 + 3.A.1.1.9
TC A46_contig_66 A46_contig_66_212 260955 262682 + 3.A.1.1.9
CAZyme A46_contig_66 A46_contig_66_213 262791 264176 + GH28
Gene ID: A46_contig_66_204
Type: CAZyme
Location: 251677 - 252498 (-)
Gene ID: A46_contig_66_205
Type: peptidase
Location: 252727 - 254544 (+)
Gene ID: A46_contig_66_206
Type:
Location: 254581 - 255102 (+)
Gene ID: A46_contig_66_207
Type: TC
Location: 255227 - 256195 (+)
Gene ID: A46_contig_66_208
Type: STP
Location: 256227 - 257984 (+)
Gene ID: A46_contig_66_209
Type: TF
Location: 257962 - 258951 (+)
Gene ID: A46_contig_66_210
Type: TC
Location: 259095 - 259985 (+)
Gene ID: A46_contig_66_211
Type: TC
Location: 260012 - 260896 (+)
Gene ID: A46_contig_66_212
Type: TC
Location: 260955 - 262682 (+)
Gene ID: A46_contig_66_213
Type: CAZyme
Location: 262791 - 264176 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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