Cluster: A46.bin_5_CGC46
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: A46.bin_5
- CGC Family ID: CGCFAM_01126
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A46_contig_66 | A46_contig_66_89 | 112538 | 114421 | - | 2.A.16.2.2 |
| CAZyme | A46_contig_66 | A46_contig_66_90 | 114667 | 115959 | + | GH125 |
| sulfatase | A46_contig_66 | A46_contig_66_91 | 116041 | 117477 | - | S1_46 |
| TC | A46_contig_66 | A46_contig_66_92 | 117790 | 118737 | + | 3.A.1.1.10 |
| TC | A46_contig_66 | A46_contig_66_93 | 118750 | 119700 | + | 3.A.1.1.29 |
| STP | A46_contig_66 | A46_contig_66_94 | 119811 | 121328 | + | SBP_bac_1 |
| TC | A46_contig_66 | A46_contig_66_95 | 121568 | 123352 | + | 8.A.59.2.1 |
| TF | A46_contig_66 | A46_contig_66_96 | 123327 | 124082 | + | HTH_AraC |
| sulfatase | A46_contig_66 | A46_contig_66_97 | 124098 | 125570 | + | S1_61 |
| CAZyme | A46_contig_66 | A46_contig_66_98 | 125572 | 127914 | + | GH3 |
| CAZyme | A46_contig_66 | A46_contig_66_99 | 127905 | 129761 | + | GH20 |
| CAZyme | A46_contig_66 | A46_contig_66_100 | 129850 | 132387 | + | GH2 |
| TC | A46_contig_66 | A46_contig_66_101 | 132487 | 134352 | + | 3.A.1.135.5 |
Gene ID: A46_contig_66_89
Type: TC
Location: 112538 - 114421 (-)
Type: TC
Location: 112538 - 114421 (-)
Gene ID: A46_contig_66_90
Type: CAZyme
Location: 114667 - 115959 (+)
Type: CAZyme
Location: 114667 - 115959 (+)
Gene ID: A46_contig_66_91
Type: sulfatase
Location: 116041 - 117477 (-)
Type: sulfatase
Location: 116041 - 117477 (-)
Gene ID: A46_contig_66_92
Type: TC
Location: 117790 - 118737 (+)
Type: TC
Location: 117790 - 118737 (+)
Gene ID: A46_contig_66_93
Type: TC
Location: 118750 - 119700 (+)
Type: TC
Location: 118750 - 119700 (+)
Gene ID: A46_contig_66_94
Type: STP
Location: 119811 - 121328 (+)
Type: STP
Location: 119811 - 121328 (+)
Gene ID: A46_contig_66_95
Type: TC
Location: 121568 - 123352 (+)
Type: TC
Location: 121568 - 123352 (+)
Gene ID: A46_contig_66_96
Type: TF
Location: 123327 - 124082 (+)
Type: TF
Location: 123327 - 124082 (+)
Gene ID: A46_contig_66_97
Type: sulfatase
Location: 124098 - 125570 (+)
Type: sulfatase
Location: 124098 - 125570 (+)
Gene ID: A46_contig_66_98
Type: CAZyme
Location: 125572 - 127914 (+)
Type: CAZyme
Location: 125572 - 127914 (+)
Gene ID: A46_contig_66_99
Type: CAZyme
Location: 127905 - 129761 (+)
Type: CAZyme
Location: 127905 - 129761 (+)
Gene ID: A46_contig_66_100
Type: CAZyme
Location: 129850 - 132387 (+)
Type: CAZyme
Location: 129850 - 132387 (+)
Gene ID: A46_contig_66_101
Type: TC
Location: 132487 - 134352 (+)
Type: TC
Location: 132487 - 134352 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.