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Cluster: A46.bin_5_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A46_contig_616 A46_contig_616_676 722217 723611 + 9.A.40.2.1
peptidase A46_contig_616 A46_contig_616_677 723682 725118 - S01.UPC
pfam A46_contig_616 A46_contig_616_678 725267 725929 - PhoU | PhoU
TC A46_contig_616 A46_contig_616_679 726290 727198 + 3.A.1.3.15
TC A46_contig_616 A46_contig_616_680 727222 727923 + 3.A.1.3.20
TC A46_contig_616 A46_contig_616_681 727913 728656 + 3.A.1.3.25
NULL(UNKNOWN) A46_contig_616 A46_contig_616_682 728770 729897 - NULL(UNKNOWN)
[View Structural Homologs]
TC A46_contig_616 A46_contig_616_683 729912 731309 - 2.A.50.2.1
NULL(UNKNOWN) A46_contig_616 A46_contig_616_684 731693 732379 - NULL(UNKNOWN)
[View Structural Homologs]
TC A46_contig_616 A46_contig_616_685 732815 733534 + 9.B.143.2.3
CAZyme A46_contig_616 A46_contig_616_686 733625 735724 + GH13_14
CAZyme A46_contig_616 A46_contig_616_687 735737 737227 + GH77
CAZyme A46_contig_616 A46_contig_616_688 737246 739582 + GH31_1
Gene ID: A46_contig_616_676
Type: TC
Location: 722217 - 723611 (+)
Gene ID: A46_contig_616_677
Type: peptidase
Location: 723682 - 725118 (-)
Gene ID: A46_contig_616_678
Type: pfam
Location: 725267 - 725929 (-)
Gene ID: A46_contig_616_679
Type: TC
Location: 726290 - 727198 (+)
Gene ID: A46_contig_616_680
Type: TC
Location: 727222 - 727923 (+)
Gene ID: A46_contig_616_681
Type: TC
Location: 727913 - 728656 (+)
Gene ID: A46_contig_616_682
Type:
Location: 728770 - 729897 (-)
Gene ID: A46_contig_616_683
Type: TC
Location: 729912 - 731309 (-)
Gene ID: A46_contig_616_684
Type:
Location: 731693 - 732379 (-)
Gene ID: A46_contig_616_685
Type: TC
Location: 732815 - 733534 (+)
Gene ID: A46_contig_616_686
Type: CAZyme
Location: 733625 - 735724 (+)
Gene ID: A46_contig_616_687
Type: CAZyme
Location: 735737 - 737227 (+)
Gene ID: A46_contig_616_688
Type: CAZyme
Location: 737246 - 739582 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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