dbCAN Logo

Cluster: A46.bin_5_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A46_contig_616 A46_contig_616_652 686578 687906 - 9.B.14.1.13
TC A46_contig_616 A46_contig_616_653 688316 689458 - 2.A.45.2.6
pfam A46_contig_616 A46_contig_616_654 689971 691401 + tRNA-synt_2b | HGTP_anticodon | ProRS-C_1
pfam A46_contig_616 A46_contig_616_655 691606 692199 + Ribosomal_L25p | Ribosomal_TL5_C
TC A46_contig_616 A46_contig_616_656 692352 693497 + 2.A.40.2.1
NULL(UNKNOWN) A46_contig_616 A46_contig_616_657 693494 693736 + NULL(UNKNOWN)
[View Structural Homologs]
pfam A46_contig_616 A46_contig_616_658 693834 695165 + SEC-C | PRiA4_ORF3
CAZyme A46_contig_616 A46_contig_616_659 695235 696611 - GH29
Gene ID: A46_contig_616_652
Type: TC
Location: 686578 - 687906 (-)
Gene ID: A46_contig_616_653
Type: TC
Location: 688316 - 689458 (-)
Gene ID: A46_contig_616_654
Type: pfam
Location: 689971 - 691401 (+)
Gene ID: A46_contig_616_655
Type: pfam
Location: 691606 - 692199 (+)
Gene ID: A46_contig_616_656
Type: TC
Location: 692352 - 693497 (+)
Gene ID: A46_contig_616_657
Type:
Location: 693494 - 693736 (+)
Gene ID: A46_contig_616_658
Type: pfam
Location: 693834 - 695165 (+)
Gene ID: A46_contig_616_659
Type: CAZyme
Location: 695235 - 696611 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List