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Cluster: A46.bin_5_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A46_contig_616 A46_contig_616_549 577967 578539 + 2.A.107.1.2
TF A46_contig_616 A46_contig_616_550 578555 580099 - HTH_AraC | HTH_AraC
TC A46_contig_616 A46_contig_616_551 580096 582054 - 8.A.59.2.1
TC A46_contig_616 A46_contig_616_552 582162 583571 - 3.A.1.1.41
TC A46_contig_616 A46_contig_616_553 583832 584701 + 3.A.1.1.28
TC A46_contig_616 A46_contig_616_554 584707 586062 + 3.A.1.1.36
CAZyme A46_contig_616 A46_contig_616_555 586123 587367 + CBM13 | GH16_3
Gene ID: A46_contig_616_549
Type: TC
Location: 577967 - 578539 (+)
Gene ID: A46_contig_616_550
Type: TF
Location: 578555 - 580099 (-)
Gene ID: A46_contig_616_551
Type: TC
Location: 580096 - 582054 (-)
Gene ID: A46_contig_616_552
Type: TC
Location: 582162 - 583571 (-)
Gene ID: A46_contig_616_553
Type: TC
Location: 583832 - 584701 (+)
Gene ID: A46_contig_616_554
Type: TC
Location: 584707 - 586062 (+)
Gene ID: A46_contig_616_555
Type: CAZyme
Location: 586123 - 587367 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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