Cluster: A46.bin_5_CGC33
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: A46.bin_5
- CGC Family ID: CGCFAM_06756
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A46_contig_616 | A46_contig_616_338 | 334639 | 335475 | - | 3.A.1.23.8 |
| TC | A46_contig_616 | A46_contig_616_339 | 335472 | 336245 | - | 3.A.1.23.6 |
| pfam | A46_contig_616 | A46_contig_616_340 | 336232 | 336546 | - | CbiN |
| TC | A46_contig_616 | A46_contig_616_341 | 336543 | 337298 | - | 3.A.1.23.8 |
| pfam | A46_contig_616 | A46_contig_616_342 | 337984 | 338736 | - | CbiJ |
| pfam | A46_contig_616 | A46_contig_616_343 | 338733 | 339818 | - | CbiG_C | CbiG_N | CbiG_mid |
| CAZyme | A46_contig_616 | A46_contig_616_344 | 339869 | 342211 | - | CBM32 | GH20 |
Gene ID: A46_contig_616_338
Type: TC
Location: 334639 - 335475 (-)
Type: TC
Location: 334639 - 335475 (-)
Gene ID: A46_contig_616_339
Type: TC
Location: 335472 - 336245 (-)
Type: TC
Location: 335472 - 336245 (-)
Gene ID: A46_contig_616_340
Type: pfam
Location: 336232 - 336546 (-)
Type: pfam
Location: 336232 - 336546 (-)
Gene ID: A46_contig_616_341
Type: TC
Location: 336543 - 337298 (-)
Type: TC
Location: 336543 - 337298 (-)
Gene ID: A46_contig_616_342
Type: pfam
Location: 337984 - 338736 (-)
Type: pfam
Location: 337984 - 338736 (-)
Gene ID: A46_contig_616_343
Type: pfam
Location: 338733 - 339818 (-)
Type: pfam
Location: 338733 - 339818 (-)
Gene ID: A46_contig_616_344
Type: CAZyme
Location: 339869 - 342211 (-)
Type: CAZyme
Location: 339869 - 342211 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.