Cluster: A46.bin_5_CGC31
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: A46.bin_5
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A46_contig_616 | A46_contig_616_239 | 222711 | 224372 | - | GH123 |
| pfam | A46_contig_616 | A46_contig_616_240 | 224446 | 225699 | - | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| NULL(UNKNOWN) | A46_contig_616 | A46_contig_616_241 | 225764 | 228031 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A46_contig_616 | A46_contig_616_242 | 228062 | 228952 | - | 3.A.1.1.9 |
| TC | A46_contig_616 | A46_contig_616_243 | 228967 | 229884 | - | 3.A.1.1.9 |
| TC | A46_contig_616 | A46_contig_616_244 | 229989 | 231743 | - | 3.A.1.1.9 |
| TF | A46_contig_616 | A46_contig_616_245 | 231928 | 233289 | - | HTH_AraC | HTH_AraC |
| TC | A46_contig_616 | A46_contig_616_246 | 233282 | 235036 | - | 9.B.33.1.1 |
| NULL(UNKNOWN) | A46_contig_616 | A46_contig_616_247 | 235183 | 235425 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | A46_contig_616 | A46_contig_616_248 | 235376 | 235567 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A46_contig_616 | A46_contig_616_249 | 235567 | 236697 | - | GH27 |
Gene ID: A46_contig_616_239
Type: CAZyme
Location: 222711 - 224372 (-)
Type: CAZyme
Location: 222711 - 224372 (-)
Gene ID: A46_contig_616_240
Type: pfam
Location: 224446 - 225699 (-)
Type: pfam
Location: 224446 - 225699 (-)
Gene ID: A46_contig_616_241
Type:
Location: 225764 - 228031 (-)
Type:
Location: 225764 - 228031 (-)
Gene ID: A46_contig_616_242
Type: TC
Location: 228062 - 228952 (-)
Type: TC
Location: 228062 - 228952 (-)
Gene ID: A46_contig_616_243
Type: TC
Location: 228967 - 229884 (-)
Type: TC
Location: 228967 - 229884 (-)
Gene ID: A46_contig_616_244
Type: TC
Location: 229989 - 231743 (-)
Type: TC
Location: 229989 - 231743 (-)
Gene ID: A46_contig_616_245
Type: TF
Location: 231928 - 233289 (-)
Type: TF
Location: 231928 - 233289 (-)
Gene ID: A46_contig_616_246
Type: TC
Location: 233282 - 235036 (-)
Type: TC
Location: 233282 - 235036 (-)
Gene ID: A46_contig_616_247
Type:
Location: 235183 - 235425 (-)
Type:
Location: 235183 - 235425 (-)
Gene ID: A46_contig_616_248
Type:
Location: 235376 - 235567 (-)
Type:
Location: 235376 - 235567 (-)
Gene ID: A46_contig_616_249
Type: CAZyme
Location: 235567 - 236697 (-)
Type: CAZyme
Location: 235567 - 236697 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.