Cluster: A46.bin_5_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: A46.bin_5
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A46_contig_840 | A46_contig_840_178 | 195219 | 196718 | + | GH136 |
| TC | A46_contig_840 | A46_contig_840_179 | 196799 | 198145 | + | 3.A.1.1.18 |
| TC | A46_contig_840 | A46_contig_840_180 | 198204 | 199109 | + | 3.A.1.1.25 |
| TC | A46_contig_840 | A46_contig_840_181 | 199123 | 199992 | + | 3.A.1.1.18 |
| pfam | A46_contig_840 | A46_contig_840_182 | 200487 | 202028 | + | PLDc | PLDc_2 | PLDc_2 | PLDc_N |
| CAZyme | A46_contig_840 | A46_contig_840_183 | 202105 | 203415 | + | GH29 |
| TC | A46_contig_840 | A46_contig_840_184 | 203500 | 204030 | - | 3.D.1.8.1 |
Gene ID: A46_contig_840_178
Type: CAZyme
Location: 195219 - 196718 (+)
Type: CAZyme
Location: 195219 - 196718 (+)
Gene ID: A46_contig_840_179
Type: TC
Location: 196799 - 198145 (+)
Type: TC
Location: 196799 - 198145 (+)
Gene ID: A46_contig_840_180
Type: TC
Location: 198204 - 199109 (+)
Type: TC
Location: 198204 - 199109 (+)
Gene ID: A46_contig_840_181
Type: TC
Location: 199123 - 199992 (+)
Type: TC
Location: 199123 - 199992 (+)
Gene ID: A46_contig_840_182
Type: pfam
Location: 200487 - 202028 (+)
Type: pfam
Location: 200487 - 202028 (+)
Gene ID: A46_contig_840_183
Type: CAZyme
Location: 202105 - 203415 (+)
Type: CAZyme
Location: 202105 - 203415 (+)
Gene ID: A46_contig_840_184
Type: TC
Location: 203500 - 204030 (-)
Type: TC
Location: 203500 - 204030 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.