Cluster: A46.bin_5_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: A46.bin_5
- CGC Family ID: CGCFAM_00026
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A46_contig_616 | A46_contig_616_209 | 187802 | 188818 | - | GH18 |
| CAZyme | A46_contig_616 | A46_contig_616_210 | 189002 | 190291 | - | GH29 |
| STP | A46_contig_616 | A46_contig_616_211 | 190425 | 192053 | - | SBP_bac_1 |
| TC | A46_contig_616 | A46_contig_616_212 | 192147 | 193082 | - | 3.A.1.1.10 |
| TC | A46_contig_616 | A46_contig_616_213 | 193095 | 194024 | - | 3.A.1.1.10 |
| CAZyme | A46_contig_616 | A46_contig_616_214 | 194435 | 195493 | + | CBM9 |
Gene ID: A46_contig_616_209
Type: CAZyme
Location: 187802 - 188818 (-)
Type: CAZyme
Location: 187802 - 188818 (-)
Gene ID: A46_contig_616_210
Type: CAZyme
Location: 189002 - 190291 (-)
Type: CAZyme
Location: 189002 - 190291 (-)
Gene ID: A46_contig_616_211
Type: STP
Location: 190425 - 192053 (-)
Type: STP
Location: 190425 - 192053 (-)
Gene ID: A46_contig_616_212
Type: TC
Location: 192147 - 193082 (-)
Type: TC
Location: 192147 - 193082 (-)
Gene ID: A46_contig_616_213
Type: TC
Location: 193095 - 194024 (-)
Type: TC
Location: 193095 - 194024 (-)
Gene ID: A46_contig_616_214
Type: CAZyme
Location: 194435 - 195493 (+)
Type: CAZyme
Location: 194435 - 195493 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.