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Cluster: A46.bin_5_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A46_contig_840 A46_contig_840_1323 1507695 1508768 + 3.A.1.11.8
TC A46_contig_840 A46_contig_840_1324 1508761 1509618 + 3.A.1.11.8
TC A46_contig_840 A46_contig_840_1325 1509615 1510391 + 3.A.1.11.1
TC A46_contig_840 A46_contig_840_1326 1510429 1511511 + 3.A.1.11.7
pfam A46_contig_840 A46_contig_840_1327 1511512 1512408 + PseudoU_synth_2
CAZyme A46_contig_840 A46_contig_840_1328 1512413 1514455 - GH127
CAZyme A46_contig_840 A46_contig_840_1329 1514471 1515766 - GH27
TF A46_contig_840 A46_contig_840_1330 1515882 1516757 + HTH_AraC | HTH_AraC
STP A46_contig_840 A46_contig_840_1331 1516792 1517565 - Fer4 | Fer4
TC A46_contig_840 A46_contig_840_1332 1517642 1518985 - 2.A.66.1.26
Gene ID: A46_contig_840_1323
Type: TC
Location: 1507695 - 1508768 (+)
Gene ID: A46_contig_840_1324
Type: TC
Location: 1508761 - 1509618 (+)
Gene ID: A46_contig_840_1325
Type: TC
Location: 1509615 - 1510391 (+)
Gene ID: A46_contig_840_1326
Type: TC
Location: 1510429 - 1511511 (+)
Gene ID: A46_contig_840_1327
Type: pfam
Location: 1511512 - 1512408 (+)
Gene ID: A46_contig_840_1328
Type: CAZyme
Location: 1512413 - 1514455 (-)
Gene ID: A46_contig_840_1329
Type: CAZyme
Location: 1514471 - 1515766 (-)
Gene ID: A46_contig_840_1330
Type: TF
Location: 1515882 - 1516757 (+)
Gene ID: A46_contig_840_1331
Type: STP
Location: 1516792 - 1517565 (-)
Gene ID: A46_contig_840_1332
Type: TC
Location: 1517642 - 1518985 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A46_contig_840_1325 vegan > omnivore 1.22695 0.04466

🧭 Explore Read Mapping of CGC

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