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Cluster: A46.bin_5_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A46_contig_840 A46_contig_840_773 876796 878934 + 3.A.1.135.6
TC A46_contig_840 A46_contig_840_774 878931 880772 + 3.A.1.135.6
CAZyme A46_contig_840 A46_contig_840_775 880913 883147 + GH36
peptidase A46_contig_840 A46_contig_840_776 883462 885267 + M03.UPB
pfam A46_contig_840 A46_contig_840_777 885602 886435 + PRD | PRD | CAT_RBD
TC A46_contig_840 A46_contig_840_778 886451 886945 + 4.A.1.2.6
TC A46_contig_840 A46_contig_840_779 886967 888583 + 8.A.7.1.1
STP A46_contig_840 A46_contig_840_780 888615 888872 + PTS-HPr
TC A46_contig_840 A46_contig_840_781 889014 890492 + 4.A.1.1.7
pfam A46_contig_840 A46_contig_840_782 890693 891418 + Glucosamine_iso
CAZyme A46_contig_840 A46_contig_840_783 891569 892708 + CE9
Gene ID: A46_contig_840_773
Type: TC
Location: 876796 - 878934 (+)
Gene ID: A46_contig_840_774
Type: TC
Location: 878931 - 880772 (+)
Gene ID: A46_contig_840_775
Type: CAZyme
Location: 880913 - 883147 (+)
Gene ID: A46_contig_840_776
Type: peptidase
Location: 883462 - 885267 (+)
Gene ID: A46_contig_840_777
Type: pfam
Location: 885602 - 886435 (+)
Gene ID: A46_contig_840_778
Type: TC
Location: 886451 - 886945 (+)
Gene ID: A46_contig_840_779
Type: TC
Location: 886967 - 888583 (+)
Gene ID: A46_contig_840_780
Type: STP
Location: 888615 - 888872 (+)
Gene ID: A46_contig_840_781
Type: TC
Location: 889014 - 890492 (+)
Gene ID: A46_contig_840_782
Type: pfam
Location: 890693 - 891418 (+)
Gene ID: A46_contig_840_783
Type: CAZyme
Location: 891569 - 892708 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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