Cluster: A46.bin_5_CGC18
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: A46.bin_5
- CGC Family ID: CGCFAM_00015
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A46_contig_840 | A46_contig_840_656 | 740758 | 742887 | + | GT2 |
| TC | A46_contig_840 | A46_contig_840_657 | 742900 | 744261 | + | 9.B.18.1.3 |
| CAZyme | A46_contig_840 | A46_contig_840_658 | 744315 | 745439 | + | GT4 |
| CAZyme | A46_contig_840 | A46_contig_840_659 | 745477 | 745761 | + | GT4 |
| TC | A46_contig_840 | A46_contig_840_660 | 745773 | 746267 | + | 9.B.97.4.1 |
| CAZyme | A46_contig_840 | A46_contig_840_661 | 746785 | 747774 | + | GT2 |
| pfam | A46_contig_840 | A46_contig_840_662 | 747807 | 748904 | + | PS_pyruv_trans |
| STP | A46_contig_840 | A46_contig_840_663 | 748911 | 750104 | + | Fer4 | Fer4 |
| CAZyme | A46_contig_840 | A46_contig_840_664 | 750123 | 750857 | + | GT2 |
| NULL(UNKNOWN) | A46_contig_840 | A46_contig_840_665 | 750878 | 752155 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A46_contig_840 | A46_contig_840_666 | 752159 | 753697 | + | 2.A.66.1.40 |
| CAZyme | A46_contig_840 | A46_contig_840_667 | 753699 | 754889 | + | GT4 |
Gene ID: A46_contig_840_656
Type: CAZyme
Location: 740758 - 742887 (+)
Type: CAZyme
Location: 740758 - 742887 (+)
Gene ID: A46_contig_840_657
Type: TC
Location: 742900 - 744261 (+)
Type: TC
Location: 742900 - 744261 (+)
Gene ID: A46_contig_840_658
Type: CAZyme
Location: 744315 - 745439 (+)
Type: CAZyme
Location: 744315 - 745439 (+)
Gene ID: A46_contig_840_659
Type: CAZyme
Location: 745477 - 745761 (+)
Type: CAZyme
Location: 745477 - 745761 (+)
Gene ID: A46_contig_840_660
Type: TC
Location: 745773 - 746267 (+)
Type: TC
Location: 745773 - 746267 (+)
Gene ID: A46_contig_840_661
Type: CAZyme
Location: 746785 - 747774 (+)
Type: CAZyme
Location: 746785 - 747774 (+)
Gene ID: A46_contig_840_662
Type: pfam
Location: 747807 - 748904 (+)
Type: pfam
Location: 747807 - 748904 (+)
Gene ID: A46_contig_840_663
Type: STP
Location: 748911 - 750104 (+)
Type: STP
Location: 748911 - 750104 (+)
Gene ID: A46_contig_840_664
Type: CAZyme
Location: 750123 - 750857 (+)
Type: CAZyme
Location: 750123 - 750857 (+)
Gene ID: A46_contig_840_665
Type:
Location: 750878 - 752155 (+)
Type:
Location: 750878 - 752155 (+)
Gene ID: A46_contig_840_666
Type: TC
Location: 752159 - 753697 (+)
Type: TC
Location: 752159 - 753697 (+)
Gene ID: A46_contig_840_667
Type: CAZyme
Location: 753699 - 754889 (+)
Type: CAZyme
Location: 753699 - 754889 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.