Cluster: A46.bin_5_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: A46.bin_5
- CGC Family ID: CGCFAM_00250
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A46_contig_840 | A46_contig_840_581 | 656746 | 658122 | + | GH29 |
| NULL(UNKNOWN) | A46_contig_840 | A46_contig_840_582 | 658140 | 660524 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A46_contig_840 | A46_contig_840_583 | 660630 | 661391 | + | CE4 |
| TF | A46_contig_840 | A46_contig_840_584 | 661453 | 662835 | + | HTH_3 |
| TC | A46_contig_840 | A46_contig_840_585 | 662900 | 664210 | + | 3.A.1.121.4 |
Gene ID: A46_contig_840_581
Type: CAZyme
Location: 656746 - 658122 (+)
Type: CAZyme
Location: 656746 - 658122 (+)
Gene ID: A46_contig_840_582
Type:
Location: 658140 - 660524 (+)
Type:
Location: 658140 - 660524 (+)
Gene ID: A46_contig_840_583
Type: CAZyme
Location: 660630 - 661391 (+)
Type: CAZyme
Location: 660630 - 661391 (+)
Gene ID: A46_contig_840_584
Type: TF
Location: 661453 - 662835 (+)
Type: TF
Location: 661453 - 662835 (+)
Gene ID: A46_contig_840_585
Type: TC
Location: 662900 - 664210 (+)
Type: TC
Location: 662900 - 664210 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.