Cluster: A46.bin_5_CGC13
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: A46.bin_5
- CGC Family ID: CGCFAM_00009
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A46_contig_840 | A46_contig_840_367 | 426288 | 427280 | + | 3.A.1.104.1 |
| TC | A46_contig_840 | A46_contig_840_368 | 427641 | 428942 | + | 3.A.1.103.6 |
| pfam | A46_contig_840 | A46_contig_840_369 | 428946 | 431111 | + | PCMT | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 |
| CAZyme | A46_contig_840 | A46_contig_840_370 | 431096 | 433096 | + | GT2 |
| CAZyme | A46_contig_840 | A46_contig_840_371 | 433122 | 435104 | + | GT2 | GT2 |
| pfam | A46_contig_840 | A46_contig_840_372 | 435181 | 436902 | + | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | A46_contig_840 | A46_contig_840_373 | 437033 | 438457 | + | GT2 |
| CAZyme | A46_contig_840 | A46_contig_840_374 | 438459 | 439415 | + | GT2 |
| TC | A46_contig_840 | A46_contig_840_375 | 439525 | 440943 | + | 9.B.18.1.1 |
| pfam | A46_contig_840 | A46_contig_840_376 | 440969 | 442132 | + | LytR_cpsA_psr |
| CAZyme | A46_contig_840 | A46_contig_840_377 | 442139 | 443068 | + | GT2 |
Gene ID: A46_contig_840_367
Type: TC
Location: 426288 - 427280 (+)
Type: TC
Location: 426288 - 427280 (+)
Gene ID: A46_contig_840_368
Type: TC
Location: 427641 - 428942 (+)
Type: TC
Location: 427641 - 428942 (+)
Gene ID: A46_contig_840_369
Type: pfam
Location: 428946 - 431111 (+)
Type: pfam
Location: 428946 - 431111 (+)
Gene ID: A46_contig_840_370
Type: CAZyme
Location: 431096 - 433096 (+)
Type: CAZyme
Location: 431096 - 433096 (+)
Gene ID: A46_contig_840_371
Type: CAZyme
Location: 433122 - 435104 (+)
Type: CAZyme
Location: 433122 - 435104 (+)
Gene ID: A46_contig_840_372
Type: pfam
Location: 435181 - 436902 (+)
Type: pfam
Location: 435181 - 436902 (+)
Gene ID: A46_contig_840_373
Type: CAZyme
Location: 437033 - 438457 (+)
Type: CAZyme
Location: 437033 - 438457 (+)
Gene ID: A46_contig_840_374
Type: CAZyme
Location: 438459 - 439415 (+)
Type: CAZyme
Location: 438459 - 439415 (+)
Gene ID: A46_contig_840_375
Type: TC
Location: 439525 - 440943 (+)
Type: TC
Location: 439525 - 440943 (+)
Gene ID: A46_contig_840_376
Type: pfam
Location: 440969 - 442132 (+)
Type: pfam
Location: 440969 - 442132 (+)
Gene ID: A46_contig_840_377
Type: CAZyme
Location: 442139 - 443068 (+)
Type: CAZyme
Location: 442139 - 443068 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.