Cluster: A46.bin_5_CGC12
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: A46.bin_5
- CGC Family ID: CGCFAM_01923
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A46_contig_840 | A46_contig_840_329 | 379736 | 381640 | + | GT26 | GT4 |
| NULL(UNKNOWN) | A46_contig_840 | A46_contig_840_330 | 381644 | 383284 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A46_contig_840 | A46_contig_840_331 | 383281 | 384486 | + | GT4 |
| pfam | A46_contig_840 | A46_contig_840_332 | 384523 | 385530 | + | Radical_SAM | SPASM |
| NULL(UNKNOWN) | A46_contig_840 | A46_contig_840_333 | 386176 | 386919 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A46_contig_840 | A46_contig_840_334 | 386916 | 387788 | + | GT101 |
| TC | A46_contig_840 | A46_contig_840_335 | 387865 | 389589 | + | 3.A.1.106.15 |
| NULL(UNKNOWN) | A46_contig_840 | A46_contig_840_336 | 389586 | 389810 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A46_contig_840 | A46_contig_840_337 | 389807 | 390643 | + | GT4 |
| CAZyme | A46_contig_840 | A46_contig_840_338 | 390648 | 391793 | + | GT4 |
| pfam | A46_contig_840 | A46_contig_840_339 | 391800 | 393350 | + | Glucos_trans_II |
| pfam | A46_contig_840 | A46_contig_840_340 | 393397 | 394413 | + | Acyl_transf_3 |
| CAZyme | A46_contig_840 | A46_contig_840_341 | 394481 | 395380 | + | GT2 |
Gene ID: A46_contig_840_329
Type: CAZyme
Location: 379736 - 381640 (+)
Type: CAZyme
Location: 379736 - 381640 (+)
Gene ID: A46_contig_840_330
Type:
Location: 381644 - 383284 (+)
Type:
Location: 381644 - 383284 (+)
Gene ID: A46_contig_840_331
Type: CAZyme
Location: 383281 - 384486 (+)
Type: CAZyme
Location: 383281 - 384486 (+)
Gene ID: A46_contig_840_332
Type: pfam
Location: 384523 - 385530 (+)
Type: pfam
Location: 384523 - 385530 (+)
Gene ID: A46_contig_840_333
Type:
Location: 386176 - 386919 (+)
Type:
Location: 386176 - 386919 (+)
Gene ID: A46_contig_840_334
Type: CAZyme
Location: 386916 - 387788 (+)
Type: CAZyme
Location: 386916 - 387788 (+)
Gene ID: A46_contig_840_335
Type: TC
Location: 387865 - 389589 (+)
Type: TC
Location: 387865 - 389589 (+)
Gene ID: A46_contig_840_336
Type:
Location: 389586 - 389810 (+)
Type:
Location: 389586 - 389810 (+)
Gene ID: A46_contig_840_337
Type: CAZyme
Location: 389807 - 390643 (+)
Type: CAZyme
Location: 389807 - 390643 (+)
Gene ID: A46_contig_840_338
Type: CAZyme
Location: 390648 - 391793 (+)
Type: CAZyme
Location: 390648 - 391793 (+)
Gene ID: A46_contig_840_339
Type: pfam
Location: 391800 - 393350 (+)
Type: pfam
Location: 391800 - 393350 (+)
Gene ID: A46_contig_840_340
Type: pfam
Location: 393397 - 394413 (+)
Type: pfam
Location: 393397 - 394413 (+)
Gene ID: A46_contig_840_341
Type: CAZyme
Location: 394481 - 395380 (+)
Type: CAZyme
Location: 394481 - 395380 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.