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Cluster: A46.bin_5_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A46_contig_840 A46_contig_840_315 360840 361826 + GT8
NULL(UNKNOWN) A46_contig_840 A46_contig_840_316 361832 362950 + NULL(UNKNOWN)
[View Structural Homologs]
pfam A46_contig_840 A46_contig_840_317 362916 364016 + Epimerase_2
TC A46_contig_840 A46_contig_840_318 364025 364834 + 3.A.1.104.1
TC A46_contig_840 A46_contig_840_319 365161 366186 + 3.A.1.103.6
CAZyme A46_contig_840 A46_contig_840_320 366200 369481 + GT2
NULL(UNKNOWN) A46_contig_840 A46_contig_840_321 369725 371857 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A46_contig_840 A46_contig_840_322 371901 372818 + GT2
Gene ID: A46_contig_840_315
Type: CAZyme
Location: 360840 - 361826 (+)
Gene ID: A46_contig_840_316
Type:
Location: 361832 - 362950 (+)
Gene ID: A46_contig_840_317
Type: pfam
Location: 362916 - 364016 (+)
Gene ID: A46_contig_840_318
Type: TC
Location: 364025 - 364834 (+)
Gene ID: A46_contig_840_319
Type: TC
Location: 365161 - 366186 (+)
Gene ID: A46_contig_840_320
Type: CAZyme
Location: 366200 - 369481 (+)
Gene ID: A46_contig_840_321
Type:
Location: 369725 - 371857 (+)
Gene ID: A46_contig_840_322
Type: CAZyme
Location: 371901 - 372818 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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