Cluster: A46.bin_5_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: A46.bin_5
- CGC Family ID: CGCFAM_00287
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A46_contig_840 | A46_contig_840_296 | 338356 | 339450 | + | GT4 |
| CAZyme | A46_contig_840 | A46_contig_840_297 | 339443 | 340462 | + | GT2 |
| CAZyme | A46_contig_840 | A46_contig_840_298 | 340483 | 341502 | + | GT2 |
| pfam | A46_contig_840 | A46_contig_840_299 | 341509 | 342684 | + | PS_pyruv_trans |
| CAZyme | A46_contig_840 | A46_contig_840_300 | 342751 | 343875 | + | GH105 |
| TC | A46_contig_840 | A46_contig_840_301 | 343863 | 345392 | + | 2.A.66.1.40 |
| CAZyme | A46_contig_840 | A46_contig_840_302 | 345476 | 346447 | + | GT11 |
Gene ID: A46_contig_840_296
Type: CAZyme
Location: 338356 - 339450 (+)
Type: CAZyme
Location: 338356 - 339450 (+)
Gene ID: A46_contig_840_297
Type: CAZyme
Location: 339443 - 340462 (+)
Type: CAZyme
Location: 339443 - 340462 (+)
Gene ID: A46_contig_840_298
Type: CAZyme
Location: 340483 - 341502 (+)
Type: CAZyme
Location: 340483 - 341502 (+)
Gene ID: A46_contig_840_299
Type: pfam
Location: 341509 - 342684 (+)
Type: pfam
Location: 341509 - 342684 (+)
Gene ID: A46_contig_840_300
Type: CAZyme
Location: 342751 - 343875 (+)
Type: CAZyme
Location: 342751 - 343875 (+)
Gene ID: A46_contig_840_301
Type: TC
Location: 343863 - 345392 (+)
Type: TC
Location: 343863 - 345392 (+)
Gene ID: A46_contig_840_302
Type: CAZyme
Location: 345476 - 346447 (+)
Type: CAZyme
Location: 345476 - 346447 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.