dbCAN Logo

Cluster: A43.bin_3_CGC97

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A43_contig_185 A43_contig_185_1234 1502980 1503771 - 3.A.1.11.8
TC A43_contig_185 A43_contig_185_1235 1503765 1504565 - 3.A.1.11.8
TC A43_contig_185 A43_contig_185_1236 1504577 1505968 - 3.A.1.11.8
pfam A43_contig_185 A43_contig_185_1237 1506107 1507210 + Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 | DUF4369
CAZyme A43_contig_185 A43_contig_185_1238 1507489 1510053 - GT35
CAZyme A43_contig_185 A43_contig_185_1239 1510091 1511752 - GT3
TC A43_contig_185 A43_contig_185_1240 1511955 1512419 - 3.A.2.2.2
TC A43_contig_185 A43_contig_185_1241 1512495 1514312 - 3.A.2.2.2
pfam A43_contig_185 A43_contig_185_1242 1514309 1514914 - ATP-synt_D
TC A43_contig_185 A43_contig_185_1243 1515023 1516351 - 3.A.2.3.3
TC A43_contig_185 A43_contig_185_1244 1516383 1518143 - 3.A.2.3.3
Gene ID: A43_contig_185_1234
Type: TC
Location: 1502980 - 1503771 (-)
Gene ID: A43_contig_185_1235
Type: TC
Location: 1503765 - 1504565 (-)
Gene ID: A43_contig_185_1236
Type: TC
Location: 1504577 - 1505968 (-)
Gene ID: A43_contig_185_1237
Type: pfam
Location: 1506107 - 1507210 (+)
Gene ID: A43_contig_185_1238
Type: CAZyme
Location: 1507489 - 1510053 (-)
Gene ID: A43_contig_185_1239
Type: CAZyme
Location: 1510091 - 1511752 (-)
Gene ID: A43_contig_185_1240
Type: TC
Location: 1511955 - 1512419 (-)
Gene ID: A43_contig_185_1241
Type: TC
Location: 1512495 - 1514312 (-)
Gene ID: A43_contig_185_1242
Type: pfam
Location: 1514309 - 1514914 (-)
Gene ID: A43_contig_185_1243
Type: TC
Location: 1515023 - 1516351 (-)
Gene ID: A43_contig_185_1244
Type: TC
Location: 1516383 - 1518143 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List