Cluster: A43.bin_3_CGC93
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: A43.bin_3
- CGC Family ID: CGCFAM_00006
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A43_contig_185 | A43_contig_185_1076 | 1313881 | 1314924 | - | 9.B.18.2.1 |
| CAZyme | A43_contig_185 | A43_contig_185_1077 | 1315108 | 1316232 | - | GT4 |
| pfam | A43_contig_185 | A43_contig_185_1078 | 1316237 | 1316884 | - | Hexapep |
| CAZyme | A43_contig_185 | A43_contig_185_1079 | 1316848 | 1317927 | - | GT4 |
| pfam | A43_contig_185 | A43_contig_185_1080 | 1317931 | 1318476 | - | Hexapep | Hexapep_2 |
| CAZyme | A43_contig_185 | A43_contig_185_1081 | 1318478 | 1319536 | - | GT4 |
| NULL(UNKNOWN) | A43_contig_185 | A43_contig_185_1082 | 1319610 | 1320203 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A43_contig_185 | A43_contig_185_1083 | 1320232 | 1321413 | - | GT4 |
Gene ID: A43_contig_185_1076
Type: TC
Location: 1313881 - 1314924 (-)
Type: TC
Location: 1313881 - 1314924 (-)
Gene ID: A43_contig_185_1077
Type: CAZyme
Location: 1315108 - 1316232 (-)
Type: CAZyme
Location: 1315108 - 1316232 (-)
Gene ID: A43_contig_185_1078
Type: pfam
Location: 1316237 - 1316884 (-)
Type: pfam
Location: 1316237 - 1316884 (-)
Gene ID: A43_contig_185_1079
Type: CAZyme
Location: 1316848 - 1317927 (-)
Type: CAZyme
Location: 1316848 - 1317927 (-)
Gene ID: A43_contig_185_1080
Type: pfam
Location: 1317931 - 1318476 (-)
Type: pfam
Location: 1317931 - 1318476 (-)
Gene ID: A43_contig_185_1081
Type: CAZyme
Location: 1318478 - 1319536 (-)
Type: CAZyme
Location: 1318478 - 1319536 (-)
Gene ID: A43_contig_185_1082
Type:
Location: 1319610 - 1320203 (-)
Type:
Location: 1319610 - 1320203 (-)
Gene ID: A43_contig_185_1083
Type: CAZyme
Location: 1320232 - 1321413 (-)
Type: CAZyme
Location: 1320232 - 1321413 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides xylanisolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A43_contig_185_1076 | vegan > omnivore | 2.55753 | 0.00290 |
| A43_contig_185_1076 | vegetarian > omnivore | 1.32871 | 0.02224 |