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Cluster: A43.bin_3_CGC91

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A43_contig_185 A43_contig_185_927 1149661 1152099 - 8.A.3.3.4
TC A43_contig_185 A43_contig_185_928 1152109 1152933 - 1.B.18.3.3
TC A43_contig_185 A43_contig_185_929 1152969 1154375 - 9.B.18.1.1
pfam A43_contig_185 A43_contig_185_930 1154428 1155498 - Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd
CAZyme A43_contig_185 A43_contig_185_931 1155574 1156341 - GT26
CAZyme A43_contig_185 A43_contig_185_932 1156709 1157752 - GT4
Gene ID: A43_contig_185_927
Type: TC
Location: 1149661 - 1152099 (-)
Gene ID: A43_contig_185_928
Type: TC
Location: 1152109 - 1152933 (-)
Gene ID: A43_contig_185_929
Type: TC
Location: 1152969 - 1154375 (-)
Gene ID: A43_contig_185_930
Type: pfam
Location: 1154428 - 1155498 (-)
Gene ID: A43_contig_185_931
Type: CAZyme
Location: 1155574 - 1156341 (-)
Gene ID: A43_contig_185_932
Type: CAZyme
Location: 1156709 - 1157752 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A43_contig_185_927 vegan > omnivore 1.01056 0.00290
A43_contig_185_930 vegan > omnivore 1.74165 0.00290
A43_contig_185_930 vegetarian > omnivore 1.57298 0.03791

🧭 Explore Read Mapping of CGC

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