Cluster: A43.bin_3_CGC77
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: A43.bin_3
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A43_contig_185 | A43_contig_185_255 | 286725 | 288965 | - | GH3 |
| sulfatase | A43_contig_185 | A43_contig_185_256 | 289038 | 290912 | - | S1_24 |
| sulfatase | A43_contig_185 | A43_contig_185_257 | 290921 | 291877 | - | S1_7 |
| CAZyme | A43_contig_185 | A43_contig_185_258 | 292113 | 293237 | - | GH3 |
| NULL(UNKNOWN) | A43_contig_185 | A43_contig_185_259 | 293324 | 294538 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A43_contig_185 | A43_contig_185_260 | 294553 | 295908 | - | GH158 |
| sulfatase | A43_contig_185 | A43_contig_185_261 | 295913 | 297559 | - | S1_24 |
| pfam | A43_contig_185 | A43_contig_185_262 | 297593 | 299179 | - | SusD_RagB | SusD-like_3 |
| TC | A43_contig_185 | A43_contig_185_263 | 299192 | 302461 | - | 1.B.14.6.1 |
Gene ID: A43_contig_185_255
Type: CAZyme
Location: 286725 - 288965 (-)
Type: CAZyme
Location: 286725 - 288965 (-)
Gene ID: A43_contig_185_256
Type: sulfatase
Location: 289038 - 290912 (-)
Type: sulfatase
Location: 289038 - 290912 (-)
Gene ID: A43_contig_185_257
Type: sulfatase
Location: 290921 - 291877 (-)
Type: sulfatase
Location: 290921 - 291877 (-)
Gene ID: A43_contig_185_258
Type: CAZyme
Location: 292113 - 293237 (-)
Type: CAZyme
Location: 292113 - 293237 (-)
Gene ID: A43_contig_185_259
Type:
Location: 293324 - 294538 (-)
Type:
Location: 293324 - 294538 (-)
Gene ID: A43_contig_185_260
Type: CAZyme
Location: 294553 - 295908 (-)
Type: CAZyme
Location: 294553 - 295908 (-)
Gene ID: A43_contig_185_261
Type: sulfatase
Location: 295913 - 297559 (-)
Type: sulfatase
Location: 295913 - 297559 (-)
Gene ID: A43_contig_185_262
Type: pfam
Location: 297593 - 299179 (-)
Type: pfam
Location: 297593 - 299179 (-)
Gene ID: A43_contig_185_263
Type: TC
Location: 299192 - 302461 (-)
Type: TC
Location: 299192 - 302461 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides xylanisolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A43_contig_185_256 | vegan > omnivore | 1.30013 | 0.00290 |
| A43_contig_185_259 | vegan > omnivore | 1.11502 | 0.00290 |
| A43_contig_185_260 | vegan > omnivore | 2.06981 | 0.00290 |
| A43_contig_185_261 | vegan > omnivore | 2.15246 | 0.00290 |
| A43_contig_185_262 | vegan > omnivore | 1.25229 | 0.00290 |
| A43_contig_185_263 | vegan > omnivore | 1.35186 | 0.00290 |