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Cluster: A43.bin_3_CGC71

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A43_contig_103 A43_contig_103_2945 3825911 3827641 + 1.B.14.6.1
TC A43_contig_103 A43_contig_103_2946 3827680 3829152 + 1.B.14.6.1
TC A43_contig_103 A43_contig_103_2947 3829164 3830639 + 8.A.46.1.2
pfam A43_contig_103 A43_contig_103_2948 3830676 3832055 + DUF5016
CAZyme A43_contig_103 A43_contig_103_2949 3832094 3834604 + GH20
CAZyme A43_contig_103 A43_contig_103_2950 3834626 3836254 + GH20
Gene ID: A43_contig_103_2945
Type: TC
Location: 3825911 - 3827641 (+)
Gene ID: A43_contig_103_2946
Type: TC
Location: 3827680 - 3829152 (+)
Gene ID: A43_contig_103_2947
Type: TC
Location: 3829164 - 3830639 (+)
Gene ID: A43_contig_103_2948
Type: pfam
Location: 3830676 - 3832055 (+)
Gene ID: A43_contig_103_2949
Type: CAZyme
Location: 3832094 - 3834604 (+)
Gene ID: A43_contig_103_2950
Type: CAZyme
Location: 3834626 - 3836254 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A43_contig_103_2945 vegan > omnivore 1.07679 0.00290
A43_contig_103_2946 vegan > omnivore 1.17623 0.00290
A43_contig_103_2947 vegan > omnivore 1.09441 0.00290
A43_contig_103_2950 vegan > omnivore 1.12457 0.00290

🧭 Explore Read Mapping of CGC

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