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Cluster: A43.bin_3_CGC65

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A43_contig_103 A43_contig_103_2536 3310341 3313703 + 1.B.14.6.1
pfam A43_contig_103 A43_contig_103_2537 3313714 3315369 + SusD_RagB | SusD-like_3
CAZyme A43_contig_103 A43_contig_103_2538 3315402 3316400 + GH43_18
NULL(UNKNOWN) A43_contig_103 A43_contig_103_2539 3316427 3318478 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A43_contig_103 A43_contig_103_2540 3318603 3320714 + GH42
CAZyme A43_contig_103 A43_contig_103_2541 3320774 3321871 + GH5_13
CAZyme A43_contig_103 A43_contig_103_2542 3321985 3323979 + GH97
Gene ID: A43_contig_103_2536
Type: TC
Location: 3310341 - 3313703 (+)
Gene ID: A43_contig_103_2537
Type: pfam
Location: 3313714 - 3315369 (+)
Gene ID: A43_contig_103_2538
Type: CAZyme
Location: 3315402 - 3316400 (+)
Gene ID: A43_contig_103_2539
Type:
Location: 3316427 - 3318478 (+)
Gene ID: A43_contig_103_2540
Type: CAZyme
Location: 3318603 - 3320714 (+)
Gene ID: A43_contig_103_2541
Type: CAZyme
Location: 3320774 - 3321871 (+)
Gene ID: A43_contig_103_2542
Type: CAZyme
Location: 3321985 - 3323979 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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