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Cluster: A43.bin_3_CGC62

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A43_contig_103 A43_contig_103_2327 3078709 3081414 - 3.A.3.2.10
TC A43_contig_103 A43_contig_103_2328 3081505 3082767 - 2.A.21.9.2
pfam A43_contig_103 A43_contig_103_2329 3082904 3083068 + Rubredoxin
TC A43_contig_103 A43_contig_103_2330 3083227 3084924 - 2.A.58.2.2
pfam A43_contig_103 A43_contig_103_2331 3085007 3086680 + PRK
NULL(UNKNOWN) A43_contig_103 A43_contig_103_2332 3086901 3087302 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A43_contig_103 A43_contig_103_2333 3087307 3088617 - CE7
Gene ID: A43_contig_103_2327
Type: TC
Location: 3078709 - 3081414 (-)
Gene ID: A43_contig_103_2328
Type: TC
Location: 3081505 - 3082767 (-)
Gene ID: A43_contig_103_2329
Type: pfam
Location: 3082904 - 3083068 (+)
Gene ID: A43_contig_103_2330
Type: TC
Location: 3083227 - 3084924 (-)
Gene ID: A43_contig_103_2331
Type: pfam
Location: 3085007 - 3086680 (+)
Gene ID: A43_contig_103_2332
Type:
Location: 3086901 - 3087302 (+)
Gene ID: A43_contig_103_2333
Type: CAZyme
Location: 3087307 - 3088617 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A43_contig_103_2332 vegan > omnivore 1.08014 0.00290

🧭 Explore Read Mapping of CGC

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