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Cluster: A43.bin_3_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A43_contig_103 A43_contig_103_2066 2778401 2781625 + 1.B.14.6.1
pfam A43_contig_103 A43_contig_103_2067 2781636 2783609 + SusD_RagB | SusD-like_3
TC A43_contig_103 A43_contig_103_2068 2783636 2786626 + 1.B.14.6.1
pfam A43_contig_103 A43_contig_103_2069 2786645 2788297 + SusD_RagB | SusD-like_3
CAZyme A43_contig_103 A43_contig_103_2070 2788328 2790616 + GH28
CAZyme A43_contig_103 A43_contig_103_2071 2790654 2792510 + GH20
CAZyme A43_contig_103 A43_contig_103_2072 2792507 2794840 + GH3
CAZyme A43_contig_103 A43_contig_103_2073 2794852 2797176 + GH20
Gene ID: A43_contig_103_2066
Type: TC
Location: 2778401 - 2781625 (+)
Gene ID: A43_contig_103_2067
Type: pfam
Location: 2781636 - 2783609 (+)
Gene ID: A43_contig_103_2068
Type: TC
Location: 2783636 - 2786626 (+)
Gene ID: A43_contig_103_2069
Type: pfam
Location: 2786645 - 2788297 (+)
Gene ID: A43_contig_103_2070
Type: CAZyme
Location: 2788328 - 2790616 (+)
Gene ID: A43_contig_103_2071
Type: CAZyme
Location: 2790654 - 2792510 (+)
Gene ID: A43_contig_103_2072
Type: CAZyme
Location: 2792507 - 2794840 (+)
Gene ID: A43_contig_103_2073
Type: CAZyme
Location: 2794852 - 2797176 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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