Cluster: A43.bin_3_CGC58
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: A43.bin_3
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A43_contig_103 | A43_contig_103_2066 | 2778401 | 2781625 | + | 1.B.14.6.1 |
| pfam | A43_contig_103 | A43_contig_103_2067 | 2781636 | 2783609 | + | SusD_RagB | SusD-like_3 |
| TC | A43_contig_103 | A43_contig_103_2068 | 2783636 | 2786626 | + | 1.B.14.6.1 |
| pfam | A43_contig_103 | A43_contig_103_2069 | 2786645 | 2788297 | + | SusD_RagB | SusD-like_3 |
| CAZyme | A43_contig_103 | A43_contig_103_2070 | 2788328 | 2790616 | + | GH28 |
| CAZyme | A43_contig_103 | A43_contig_103_2071 | 2790654 | 2792510 | + | GH20 |
| CAZyme | A43_contig_103 | A43_contig_103_2072 | 2792507 | 2794840 | + | GH3 |
| CAZyme | A43_contig_103 | A43_contig_103_2073 | 2794852 | 2797176 | + | GH20 |
Gene ID: A43_contig_103_2066
Type: TC
Location: 2778401 - 2781625 (+)
Type: TC
Location: 2778401 - 2781625 (+)
Gene ID: A43_contig_103_2067
Type: pfam
Location: 2781636 - 2783609 (+)
Type: pfam
Location: 2781636 - 2783609 (+)
Gene ID: A43_contig_103_2068
Type: TC
Location: 2783636 - 2786626 (+)
Type: TC
Location: 2783636 - 2786626 (+)
Gene ID: A43_contig_103_2069
Type: pfam
Location: 2786645 - 2788297 (+)
Type: pfam
Location: 2786645 - 2788297 (+)
Gene ID: A43_contig_103_2070
Type: CAZyme
Location: 2788328 - 2790616 (+)
Type: CAZyme
Location: 2788328 - 2790616 (+)
Gene ID: A43_contig_103_2071
Type: CAZyme
Location: 2790654 - 2792510 (+)
Type: CAZyme
Location: 2790654 - 2792510 (+)
Gene ID: A43_contig_103_2072
Type: CAZyme
Location: 2792507 - 2794840 (+)
Type: CAZyme
Location: 2792507 - 2794840 (+)
Gene ID: A43_contig_103_2073
Type: CAZyme
Location: 2794852 - 2797176 (+)
Type: CAZyme
Location: 2794852 - 2797176 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides xylanisolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.