Cluster: A43.bin_3_CGC51
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: A43.bin_3
- CGC Family ID: CGCFAM_03105
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A43_contig_103 | A43_contig_103_1771 | 2355667 | 2356422 | - | 3.D.10.1.5 |
| TC | A43_contig_103 | A43_contig_103_1772 | 2356459 | 2358438 | - | 3.D.10.1.5 |
| NULL(UNKNOWN) | A43_contig_103 | A43_contig_103_1773 | 2358476 | 2359180 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | A43_contig_103 | A43_contig_103_1774 | 2359392 | 2360261 | - | HTH_AraC |
| CAZyme | A43_contig_103 | A43_contig_103_1775 | 2360535 | 2361497 | + | GH18 |
| pfam | A43_contig_103 | A43_contig_103_1776 | 2361630 | 2362418 | - | Bro-N |
| pfam | A43_contig_103 | A43_contig_103_1777 | 2362446 | 2363084 | - | Bac_DNA_binding | HU-HIG |
| TC | A43_contig_103 | A43_contig_103_1778 | 2363775 | 2365358 | - | 9.B.174.1.1 |
Gene ID: A43_contig_103_1771
Type: TC
Location: 2355667 - 2356422 (-)
Type: TC
Location: 2355667 - 2356422 (-)
Gene ID: A43_contig_103_1772
Type: TC
Location: 2356459 - 2358438 (-)
Type: TC
Location: 2356459 - 2358438 (-)
Gene ID: A43_contig_103_1773
Type:
Location: 2358476 - 2359180 (-)
Type:
Location: 2358476 - 2359180 (-)
Gene ID: A43_contig_103_1774
Type: TF
Location: 2359392 - 2360261 (-)
Type: TF
Location: 2359392 - 2360261 (-)
Gene ID: A43_contig_103_1775
Type: CAZyme
Location: 2360535 - 2361497 (+)
Type: CAZyme
Location: 2360535 - 2361497 (+)
Gene ID: A43_contig_103_1776
Type: pfam
Location: 2361630 - 2362418 (-)
Type: pfam
Location: 2361630 - 2362418 (-)
Gene ID: A43_contig_103_1777
Type: pfam
Location: 2362446 - 2363084 (-)
Type: pfam
Location: 2362446 - 2363084 (-)
Gene ID: A43_contig_103_1778
Type: TC
Location: 2363775 - 2365358 (-)
Type: TC
Location: 2363775 - 2365358 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides xylanisolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.