Cluster: A43.bin_3_CGC46
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: A43.bin_3
- CGC Family ID: CGCFAM_01105
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A43_contig_103 | A43_contig_103_1601 | 2099592 | 2100983 | - | 2.A.6.2.25 |
| TC | A43_contig_103 | A43_contig_103_1602 | 2100995 | 2104426 | - | 2.A.6.2.22 |
| TC | A43_contig_103 | A43_contig_103_1603 | 2104442 | 2105677 | - | 8.A.1.6.3 |
| CAZyme | A43_contig_103 | A43_contig_103_1604 | 2105802 | 2108909 | - | GH2 |
| TC | A43_contig_103 | A43_contig_103_1605 | 2109344 | 2112520 | + | 1.B.14.6.1 |
| pfam | A43_contig_103 | A43_contig_103_1606 | 2112532 | 2114328 | + | SusD_RagB | SusD-like_3 |
| TC | A43_contig_103 | A43_contig_103_1607 | 2114362 | 2117127 | + | 1.B.14.6.1 |
Gene ID: A43_contig_103_1601
Type: TC
Location: 2099592 - 2100983 (-)
Type: TC
Location: 2099592 - 2100983 (-)
Gene ID: A43_contig_103_1602
Type: TC
Location: 2100995 - 2104426 (-)
Type: TC
Location: 2100995 - 2104426 (-)
Gene ID: A43_contig_103_1603
Type: TC
Location: 2104442 - 2105677 (-)
Type: TC
Location: 2104442 - 2105677 (-)
Gene ID: A43_contig_103_1604
Type: CAZyme
Location: 2105802 - 2108909 (-)
Type: CAZyme
Location: 2105802 - 2108909 (-)
Gene ID: A43_contig_103_1605
Type: TC
Location: 2109344 - 2112520 (+)
Type: TC
Location: 2109344 - 2112520 (+)
Gene ID: A43_contig_103_1606
Type: pfam
Location: 2112532 - 2114328 (+)
Type: pfam
Location: 2112532 - 2114328 (+)
Gene ID: A43_contig_103_1607
Type: TC
Location: 2114362 - 2117127 (+)
Type: TC
Location: 2114362 - 2117127 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides xylanisolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.