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Cluster: A43.bin_3_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A43_contig_103 A43_contig_103_1482 1926852 1927466 - CE4
pfam A43_contig_103 A43_contig_103_1483 1927578 1930991 - TMEM260-like
pfam A43_contig_103 A43_contig_103_1484 1931291 1932196 + DDE_Tnp_1 | DDE_Tnp_1_3
TC A43_contig_103 A43_contig_103_1485 1932592 1933431 - 3.A.1.15.15
pfam A43_contig_103 A43_contig_103_1486 1933466 1934395 - ZnuA
pfam A43_contig_103 A43_contig_103_1487 1934434 1935171 - Methyltransf_30
TC A43_contig_103 A43_contig_103_1488 1935228 1935707 - 9.B.27.3.2
Gene ID: A43_contig_103_1482
Type: CAZyme
Location: 1926852 - 1927466 (-)
Gene ID: A43_contig_103_1483
Type: pfam
Location: 1927578 - 1930991 (-)
Gene ID: A43_contig_103_1484
Type: pfam
Location: 1931291 - 1932196 (+)
Gene ID: A43_contig_103_1485
Type: TC
Location: 1932592 - 1933431 (-)
Gene ID: A43_contig_103_1486
Type: pfam
Location: 1933466 - 1934395 (-)
Gene ID: A43_contig_103_1487
Type: pfam
Location: 1934434 - 1935171 (-)
Gene ID: A43_contig_103_1488
Type: TC
Location: 1935228 - 1935707 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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