Cluster: A43.bin_3_CGC42
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A43.bin_3
- CGC Family ID: CGCFAM_00461
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A43_contig_103 | A43_contig_103_1418 | 1852661 | 1854214 | - | 8.A.46.1.6 |
| TC | A43_contig_103 | A43_contig_103_1419 | 1854239 | 1857307 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | A43_contig_103 | A43_contig_103_1420 | 1857325 | 1859025 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A43_contig_103 | A43_contig_103_1421 | 1859042 | 1860304 | - | 2.A.1.33.2 |
| CAZyme | A43_contig_103 | A43_contig_103_1422 | 1860304 | 1861362 | - | GH130_4 |
Gene ID: A43_contig_103_1418
Type: TC
Location: 1852661 - 1854214 (-)
Type: TC
Location: 1852661 - 1854214 (-)
Gene ID: A43_contig_103_1419
Type: TC
Location: 1854239 - 1857307 (-)
Type: TC
Location: 1854239 - 1857307 (-)
Gene ID: A43_contig_103_1420
Type:
Location: 1857325 - 1859025 (-)
Type:
Location: 1857325 - 1859025 (-)
Gene ID: A43_contig_103_1421
Type: TC
Location: 1859042 - 1860304 (-)
Type: TC
Location: 1859042 - 1860304 (-)
Gene ID: A43_contig_103_1422
Type: CAZyme
Location: 1860304 - 1861362 (-)
Type: CAZyme
Location: 1860304 - 1861362 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides xylanisolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A43_contig_103_1418 | vegan > omnivore | 1.44908 | 0.00290 |
| A43_contig_103_1419 | vegan > omnivore | 1.49415 | 0.00290 |
| A43_contig_103_1420 | vegan > omnivore | 1.38782 | 0.00290 |
| A43_contig_103_1421 | vegan > omnivore | 1.52356 | 0.00290 |
| A43_contig_103_1422 | vegan > omnivore | 1.65023 | 0.00290 |