Cluster: A43.bin_3_CGC40
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: A43.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A43_contig_103 | A43_contig_103_1380 | 1791414 | 1792847 | - | CE20 |
| CAZyme | A43_contig_103 | A43_contig_103_1381 | 1792999 | 1794177 | - | GH88 |
| CAZyme | A43_contig_103 | A43_contig_103_1382 | 1794197 | 1796182 | - | PL35 |
| CAZyme | A43_contig_103 | A43_contig_103_1383 | 1796187 | 1798013 | - | PL35 |
| STP | A43_contig_103 | A43_contig_103_1384 | 1798025 | 1799827 | - | TPR_1 |
| TC | A43_contig_103 | A43_contig_103_1385 | 1799862 | 1803113 | - | 1.B.14.6.1 |
| TF | A43_contig_103 | A43_contig_103_1386 | 1803467 | 1807435 | + | HTH_AraC |
| TF | A43_contig_103 | A43_contig_103_1387 | 1807974 | 1808885 | - | 0035607 |
| TC | A43_contig_103 | A43_contig_103_1388 | 1809109 | 1810215 | + | 2.A.6.2.29 |
| TC | A43_contig_103 | A43_contig_103_1389 | 1810230 | 1813409 | + | 2.A.6.2.22 |
| TC | A43_contig_103 | A43_contig_103_1390 | 1813422 | 1814786 | + | 2.A.6.2.23 |
| TF | A43_contig_103 | A43_contig_103_1391 | 1814944 | 1818888 | - | HTH_AraC |
| CAZyme | A43_contig_103 | A43_contig_103_1392 | 1818925 | 1821372 | - | GH95 |
Gene ID: A43_contig_103_1380
Type: CAZyme
Location: 1791414 - 1792847 (-)
Type: CAZyme
Location: 1791414 - 1792847 (-)
Gene ID: A43_contig_103_1381
Type: CAZyme
Location: 1792999 - 1794177 (-)
Type: CAZyme
Location: 1792999 - 1794177 (-)
Gene ID: A43_contig_103_1382
Type: CAZyme
Location: 1794197 - 1796182 (-)
Type: CAZyme
Location: 1794197 - 1796182 (-)
Gene ID: A43_contig_103_1383
Type: CAZyme
Location: 1796187 - 1798013 (-)
Type: CAZyme
Location: 1796187 - 1798013 (-)
Gene ID: A43_contig_103_1384
Type: STP
Location: 1798025 - 1799827 (-)
Type: STP
Location: 1798025 - 1799827 (-)
Gene ID: A43_contig_103_1385
Type: TC
Location: 1799862 - 1803113 (-)
Type: TC
Location: 1799862 - 1803113 (-)
Gene ID: A43_contig_103_1386
Type: TF
Location: 1803467 - 1807435 (+)
Type: TF
Location: 1803467 - 1807435 (+)
Gene ID: A43_contig_103_1387
Type: TF
Location: 1807974 - 1808885 (-)
Type: TF
Location: 1807974 - 1808885 (-)
Gene ID: A43_contig_103_1388
Type: TC
Location: 1809109 - 1810215 (+)
Type: TC
Location: 1809109 - 1810215 (+)
Gene ID: A43_contig_103_1389
Type: TC
Location: 1810230 - 1813409 (+)
Type: TC
Location: 1810230 - 1813409 (+)
Gene ID: A43_contig_103_1390
Type: TC
Location: 1813422 - 1814786 (+)
Type: TC
Location: 1813422 - 1814786 (+)
Gene ID: A43_contig_103_1391
Type: TF
Location: 1814944 - 1818888 (-)
Type: TF
Location: 1814944 - 1818888 (-)
Gene ID: A43_contig_103_1392
Type: CAZyme
Location: 1818925 - 1821372 (-)
Type: CAZyme
Location: 1818925 - 1821372 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides xylanisolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.