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Cluster: A43.bin_3_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A43_contig_103 A43_contig_103_1187 1527520 1528743 + CE15
NULL(UNKNOWN) A43_contig_103 A43_contig_103_1188 1528774 1530420 + NULL(UNKNOWN)
[View Structural Homologs]
TC A43_contig_103 A43_contig_103_1189 1530545 1533622 + 1.B.14.6.1
TC A43_contig_103 A43_contig_103_1190 1533636 1535132 + 8.A.46.1.3
NULL(UNKNOWN) A43_contig_103 A43_contig_103_1191 1535160 1537673 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A43_contig_103 A43_contig_103_1192 1537740 1539368 + GH20
CAZyme A43_contig_103 A43_contig_103_1193 1539386 1541035 + GH32
TC A43_contig_103 A43_contig_103_1194 1541147 1542463 + 2.A.1.7.9
CAZyme A43_contig_103 A43_contig_103_1195 1542496 1543683 + CE9
Gene ID: A43_contig_103_1187
Type: CAZyme
Location: 1527520 - 1528743 (+)
Gene ID: A43_contig_103_1188
Type:
Location: 1528774 - 1530420 (+)
Gene ID: A43_contig_103_1189
Type: TC
Location: 1530545 - 1533622 (+)
Gene ID: A43_contig_103_1190
Type: TC
Location: 1533636 - 1535132 (+)
Gene ID: A43_contig_103_1191
Type:
Location: 1535160 - 1537673 (+)
Gene ID: A43_contig_103_1192
Type: CAZyme
Location: 1537740 - 1539368 (+)
Gene ID: A43_contig_103_1193
Type: CAZyme
Location: 1539386 - 1541035 (+)
Gene ID: A43_contig_103_1194
Type: TC
Location: 1541147 - 1542463 (+)
Gene ID: A43_contig_103_1195
Type: CAZyme
Location: 1542496 - 1543683 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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