Cluster: A43.bin_3_CGC20
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate:
- Genome ID: A43.bin_3
- CGC Family ID: CGCFAM_03100
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A43_contig_103 | A43_contig_103_711 | 890287 | 893382 | + | 1.B.14.6.1 |
| TF | A43_contig_103 | A43_contig_103_712 | 893638 | 894435 | - | KilA-N |
| CAZyme | A43_contig_103 | A43_contig_103_713 | 894820 | 896964 | - | GH31_1 |
| pfam | A43_contig_103 | A43_contig_103_714 | 897629 | 898777 | - | DDE_Tnp_ISL3 | DDE_Tnp_ISL3 |
| pfam | A43_contig_103 | A43_contig_103_715 | 898888 | 899295 | - | Zn_ribbon_ISL3 |
| CAZyme | A43_contig_103 | A43_contig_103_716 | 900025 | 902697 | - | GH78 |
| pfam | A43_contig_103 | A43_contig_103_717 | 902716 | 904092 | - | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | A43_contig_103 | A43_contig_103_718 | 904168 | 907257 | - | CBM32 | GH2 |
| CAZyme | A43_contig_103 | A43_contig_103_719 | 907306 | 909645 | - | GH92 |
| CAZyme | A43_contig_103 | A43_contig_103_720 | 909664 | 912228 | - | GH38 |
Gene ID: A43_contig_103_711
Type: TC
Location: 890287 - 893382 (+)
Type: TC
Location: 890287 - 893382 (+)
Gene ID: A43_contig_103_712
Type: TF
Location: 893638 - 894435 (-)
Type: TF
Location: 893638 - 894435 (-)
Gene ID: A43_contig_103_713
Type: CAZyme
Location: 894820 - 896964 (-)
Type: CAZyme
Location: 894820 - 896964 (-)
Gene ID: A43_contig_103_714
Type: pfam
Location: 897629 - 898777 (-)
Type: pfam
Location: 897629 - 898777 (-)
Gene ID: A43_contig_103_715
Type: pfam
Location: 898888 - 899295 (-)
Type: pfam
Location: 898888 - 899295 (-)
Gene ID: A43_contig_103_716
Type: CAZyme
Location: 900025 - 902697 (-)
Type: CAZyme
Location: 900025 - 902697 (-)
Gene ID: A43_contig_103_717
Type: pfam
Location: 902716 - 904092 (-)
Type: pfam
Location: 902716 - 904092 (-)
Gene ID: A43_contig_103_718
Type: CAZyme
Location: 904168 - 907257 (-)
Type: CAZyme
Location: 904168 - 907257 (-)
Gene ID: A43_contig_103_719
Type: CAZyme
Location: 907306 - 909645 (-)
Type: CAZyme
Location: 907306 - 909645 (-)
Gene ID: A43_contig_103_720
Type: CAZyme
Location: 909664 - 912228 (-)
Type: CAZyme
Location: 909664 - 912228 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides xylanisolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A43_contig_103_718 | vegan > omnivore | 1.28017 | 0.00290 |