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Cluster: A43.bin_3_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A43_contig_103 A43_contig_103_700 871533 872969 + 2.A.38.1.1
pfam A43_contig_103 A43_contig_103_701 873183 874565 - Lipase_GDSL | Lipase_GDSL_2
CAZyme A43_contig_103 A43_contig_103_702 874615 875748 - GH130_3
CAZyme A43_contig_103 A43_contig_103_703 875827 877983 - GH92
CAZyme A43_contig_103 A43_contig_103_704 878014 880287 - GH92
pfam A43_contig_103 A43_contig_103_705 880565 881869 - DUF5005
TC A43_contig_103 A43_contig_103_706 882227 884071 + 8.A.46.1.3
Gene ID: A43_contig_103_700
Type: TC
Location: 871533 - 872969 (+)
Gene ID: A43_contig_103_701
Type: pfam
Location: 873183 - 874565 (-)
Gene ID: A43_contig_103_702
Type: CAZyme
Location: 874615 - 875748 (-)
Gene ID: A43_contig_103_703
Type: CAZyme
Location: 875827 - 877983 (-)
Gene ID: A43_contig_103_704
Type: CAZyme
Location: 878014 - 880287 (-)
Gene ID: A43_contig_103_705
Type: pfam
Location: 880565 - 881869 (-)
Gene ID: A43_contig_103_706
Type: TC
Location: 882227 - 884071 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A43_contig_103_705 vegan > omnivore 1.08613 0.00290
A43_contig_103_706 vegan > omnivore 1.13724 0.00290

🧭 Explore Read Mapping of CGC

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