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Cluster: A43.bin_3_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A43_contig_103 A43_contig_103_687 850536 852275 - CE12 | CE8
CAZyme A43_contig_103 A43_contig_103_688 852643 853614 - CE8
CAZyme A43_contig_103 A43_contig_103_689 853624 854823 - GH105
TC A43_contig_103 A43_contig_103_690 855126 856532 + 4.A.5.1.4
pfam A43_contig_103 A43_contig_103_691 856600 857520 + KduI
TC A43_contig_103 A43_contig_103_692 857848 859365 + 2.A.1.14.25
pfam A43_contig_103 A43_contig_103_693 859765 863352 - DEAD | ResIII | AAA_11 | AAA_11 | AAA_12 | AAA_19 | AAA_30
TC A43_contig_103 A43_contig_103_694 863315 864151 - 2.A.64.1.2
Gene ID: A43_contig_103_687
Type: CAZyme
Location: 850536 - 852275 (-)
Gene ID: A43_contig_103_688
Type: CAZyme
Location: 852643 - 853614 (-)
Gene ID: A43_contig_103_689
Type: CAZyme
Location: 853624 - 854823 (-)
Gene ID: A43_contig_103_690
Type: TC
Location: 855126 - 856532 (+)
Gene ID: A43_contig_103_691
Type: pfam
Location: 856600 - 857520 (+)
Gene ID: A43_contig_103_692
Type: TC
Location: 857848 - 859365 (+)
Gene ID: A43_contig_103_693
Type: pfam
Location: 859765 - 863352 (-)
Gene ID: A43_contig_103_694
Type: TC
Location: 863315 - 864151 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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