Cluster: A43.bin_3_CGC12
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: A43.bin_3
- CGC Family ID: CGCFAM_00170
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A43_contig_103 | A43_contig_103_511 | 607225 | 608058 | + | GT5 |
| pfam | A43_contig_103 | A43_contig_103_512 | 608080 | 609771 | + | DUF4270 |
| CAZyme | A43_contig_103 | A43_contig_103_513 | 610141 | 611595 | - | GH57 |
| CAZyme | A43_contig_103 | A43_contig_103_514 | 611613 | 612878 | - | GT4 |
| CAZyme | A43_contig_103 | A43_contig_103_515 | 612895 | 614832 | - | GH133 |
| TC | A43_contig_103 | A43_contig_103_516 | 615046 | 615681 | + | 9.B.104.3.2 |
| pfam | A43_contig_103 | A43_contig_103_517 | 615861 | 616982 | - | Laminin_G_3 | DUF4972 |
| CAZyme | A43_contig_103 | A43_contig_103_518 | 617009 | 618172 | - | GH99 |
| CAZyme | A43_contig_103 | A43_contig_103_519 | 618203 | 620440 | - | GH92 |
| pfam | A43_contig_103 | A43_contig_103_520 | 620456 | 621148 | - | DUF3823 | DUF3823_C |
| pfam | A43_contig_103 | A43_contig_103_521 | 621181 | 623139 | - | SusD_RagB | SusD-like_3 |
| TC | A43_contig_103 | A43_contig_103_522 | 623146 | 626274 | - | 1.B.14.6.1 |
Gene ID: A43_contig_103_511
Type: CAZyme
Location: 607225 - 608058 (+)
Type: CAZyme
Location: 607225 - 608058 (+)
Gene ID: A43_contig_103_512
Type: pfam
Location: 608080 - 609771 (+)
Type: pfam
Location: 608080 - 609771 (+)
Gene ID: A43_contig_103_513
Type: CAZyme
Location: 610141 - 611595 (-)
Type: CAZyme
Location: 610141 - 611595 (-)
Gene ID: A43_contig_103_514
Type: CAZyme
Location: 611613 - 612878 (-)
Type: CAZyme
Location: 611613 - 612878 (-)
Gene ID: A43_contig_103_515
Type: CAZyme
Location: 612895 - 614832 (-)
Type: CAZyme
Location: 612895 - 614832 (-)
Gene ID: A43_contig_103_516
Type: TC
Location: 615046 - 615681 (+)
Type: TC
Location: 615046 - 615681 (+)
Gene ID: A43_contig_103_517
Type: pfam
Location: 615861 - 616982 (-)
Type: pfam
Location: 615861 - 616982 (-)
Gene ID: A43_contig_103_518
Type: CAZyme
Location: 617009 - 618172 (-)
Type: CAZyme
Location: 617009 - 618172 (-)
Gene ID: A43_contig_103_519
Type: CAZyme
Location: 618203 - 620440 (-)
Type: CAZyme
Location: 618203 - 620440 (-)
Gene ID: A43_contig_103_520
Type: pfam
Location: 620456 - 621148 (-)
Type: pfam
Location: 620456 - 621148 (-)
Gene ID: A43_contig_103_521
Type: pfam
Location: 621181 - 623139 (-)
Type: pfam
Location: 621181 - 623139 (-)
Gene ID: A43_contig_103_522
Type: TC
Location: 623146 - 626274 (-)
Type: TC
Location: 623146 - 626274 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides xylanisolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.