Cluster: A43.bin_3_CGC102
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate: fructan
- Genome ID: A43.bin_3
- CGC Family ID: CGCFAM_00017
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A43_contig_185 | A43_contig_185_1740 | 2085244 | 2090829 | - | 1.B.14.6.1 |
| STP | A43_contig_185 | A43_contig_185_1741 | 2091220 | 2092107 | - | PfkB |
| TC | A43_contig_185 | A43_contig_185_1742 | 2092143 | 2093312 | - | 2.A.1.7.17 |
| CAZyme | A43_contig_185 | A43_contig_185_1743 | 2093697 | 2095523 | - | GH32 |
| CAZyme | A43_contig_185 | A43_contig_185_1744 | 2095649 | 2097598 | - | GH91 |
| CAZyme | A43_contig_185 | A43_contig_185_1745 | 2097636 | 2098763 | - | GH91 |
| pfam | A43_contig_185 | A43_contig_185_1746 | 2098789 | 2100546 | - | SusD_RagB | SusD-like_3 |
| TC | A43_contig_185 | A43_contig_185_1747 | 2100571 | 2103642 | - | 1.B.14.6.1 |
| pfam | A43_contig_185 | A43_contig_185_1748 | 2103960 | 2104832 | + | Aldose_epim |
| CAZyme | A43_contig_185 | A43_contig_185_1749 | 2105022 | 2106902 | - | GH32 |
| pfam | A43_contig_185 | A43_contig_185_1750 | 2107125 | 2108147 | + | WYL |
| pfam | A43_contig_185 | A43_contig_185_1751 | 2108139 | 2108984 | - | Patatin | DUF6363 |
| TC | A43_contig_185 | A43_contig_185_1752 | 2108965 | 2111187 | - | 2.A.37.4.2 |
Gene ID: A43_contig_185_1740
Type: TC
Location: 2085244 - 2090829 (-)
Type: TC
Location: 2085244 - 2090829 (-)
Gene ID: A43_contig_185_1741
Type: STP
Location: 2091220 - 2092107 (-)
Type: STP
Location: 2091220 - 2092107 (-)
Gene ID: A43_contig_185_1742
Type: TC
Location: 2092143 - 2093312 (-)
Type: TC
Location: 2092143 - 2093312 (-)
Gene ID: A43_contig_185_1743
Type: CAZyme
Location: 2093697 - 2095523 (-)
Type: CAZyme
Location: 2093697 - 2095523 (-)
Gene ID: A43_contig_185_1744
Type: CAZyme
Location: 2095649 - 2097598 (-)
Type: CAZyme
Location: 2095649 - 2097598 (-)
Gene ID: A43_contig_185_1745
Type: CAZyme
Location: 2097636 - 2098763 (-)
Type: CAZyme
Location: 2097636 - 2098763 (-)
Gene ID: A43_contig_185_1746
Type: pfam
Location: 2098789 - 2100546 (-)
Type: pfam
Location: 2098789 - 2100546 (-)
Gene ID: A43_contig_185_1747
Type: TC
Location: 2100571 - 2103642 (-)
Type: TC
Location: 2100571 - 2103642 (-)
Gene ID: A43_contig_185_1748
Type: pfam
Location: 2103960 - 2104832 (+)
Type: pfam
Location: 2103960 - 2104832 (+)
Gene ID: A43_contig_185_1749
Type: CAZyme
Location: 2105022 - 2106902 (-)
Type: CAZyme
Location: 2105022 - 2106902 (-)
Gene ID: A43_contig_185_1750
Type: pfam
Location: 2107125 - 2108147 (+)
Type: pfam
Location: 2107125 - 2108147 (+)
Gene ID: A43_contig_185_1751
Type: pfam
Location: 2108139 - 2108984 (-)
Type: pfam
Location: 2108139 - 2108984 (-)
Gene ID: A43_contig_185_1752
Type: TC
Location: 2108965 - 2111187 (-)
Type: TC
Location: 2108965 - 2111187 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides xylanisolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A43_contig_185_1750 | vegan > omnivore | 1.03689 | 0.00290 |