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Cluster: A43.CMAG_1_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A43_contig_713 A43_contig_713_1761 1928924 1929853 - GT2
TC A43_contig_713 A43_contig_713_1762 1930311 1931069 - 3.A.1.3.24
TC A43_contig_713 A43_contig_713_1763 1931082 1931729 - 3.A.1.3.15
TC A43_contig_713 A43_contig_713_1764 1931914 1932732 - 3.A.1.3.27
Gene ID: A43_contig_713_1761
Type: CAZyme
Location: 1928924 - 1929853 (-)
Gene ID: A43_contig_713_1762
Type: TC
Location: 1930311 - 1931069 (-)
Gene ID: A43_contig_713_1763
Type: TC
Location: 1931082 - 1931729 (-)
Gene ID: A43_contig_713_1764
Type: TC
Location: 1931914 - 1932732 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A43_contig_713_1763 vegetarian > omnivore 2.04570 0.01061
A43_contig_713_1764 vegetarian > omnivore 1.93780 0.01061

🧭 Explore Read Mapping of CGC

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