Cluster: A38.bin_27_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: A38.bin_27
- CGC Family ID: CGCFAM_00010
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A38_contig_425 | A38_contig_425_57 | 66230 | 67720 | - | GH77 |
| TF | A38_contig_425 | A38_contig_425_58 | 67738 | 68745 | - | LacI |
| TC | A38_contig_425 | A38_contig_425_59 | 68799 | 69632 | - | 3.A.1.1.45 |
| TC | A38_contig_425 | A38_contig_425_60 | 69632 | 70474 | - | 3.A.1.1.45 |
| TC | A38_contig_425 | A38_contig_425_61 | 70545 | 71873 | - | 3.A.1.1.45 |
| TC | A38_contig_425 | A38_contig_425_62 | 72329 | 73507 | + | 3.A.1.1.26 |
Gene ID: A38_contig_425_57
Type: CAZyme
Location: 66230 - 67720 (-)
Type: CAZyme
Location: 66230 - 67720 (-)
Gene ID: A38_contig_425_58
Type: TF
Location: 67738 - 68745 (-)
Type: TF
Location: 67738 - 68745 (-)
Gene ID: A38_contig_425_59
Type: TC
Location: 68799 - 69632 (-)
Type: TC
Location: 68799 - 69632 (-)
Gene ID: A38_contig_425_60
Type: TC
Location: 69632 - 70474 (-)
Type: TC
Location: 69632 - 70474 (-)
Gene ID: A38_contig_425_61
Type: TC
Location: 70545 - 71873 (-)
Type: TC
Location: 70545 - 71873 (-)
Gene ID: A38_contig_425_62
Type: TC
Location: 72329 - 73507 (+)
Type: TC
Location: 72329 - 73507 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_D
Species
Dorea_D hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A38_contig_425_60 | vegan > omnivore | 1.39030 | 0.03778 |
| A38_contig_425_60 | vegetarian > omnivore | 1.15442 | 0.03201 |
| A38_contig_425_61 | vegetarian > omnivore | 1.23110 | 0.03201 |