Cluster: A38.bin_27_CGC16
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 6
- Substrate:
- Genome ID: A38.bin_27
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A38_contig_425 | A38_contig_425_1185 | 1308028 | 1308969 | - | GT2 |
| pfam | A38_contig_425 | A38_contig_425_1186 | 1308990 | 1310258 | - | Wzy_C |
| pfam | A38_contig_425 | A38_contig_425_1187 | 1310236 | 1311342 | - | PS_pyruv_trans |
| CAZyme | A38_contig_425 | A38_contig_425_1188 | 1311360 | 1312352 | - | GT2 |
| CAZyme | A38_contig_425 | A38_contig_425_1189 | 1312440 | 1313381 | - | GT32 |
| CAZyme | A38_contig_425 | A38_contig_425_1190 | 1313432 | 1314286 | - | GT32 |
| CAZyme | A38_contig_425 | A38_contig_425_1191 | 1314264 | 1315490 | - | GT4 |
| CAZyme | A38_contig_425 | A38_contig_425_1192 | 1315581 | 1316726 | - | GT4 |
| TC | A38_contig_425 | A38_contig_425_1193 | 1316806 | 1318257 | - | 9.B.18.1.2 |
Gene ID: A38_contig_425_1185
Type: CAZyme
Location: 1308028 - 1308969 (-)
Type: CAZyme
Location: 1308028 - 1308969 (-)
Gene ID: A38_contig_425_1186
Type: pfam
Location: 1308990 - 1310258 (-)
Type: pfam
Location: 1308990 - 1310258 (-)
Gene ID: A38_contig_425_1187
Type: pfam
Location: 1310236 - 1311342 (-)
Type: pfam
Location: 1310236 - 1311342 (-)
Gene ID: A38_contig_425_1188
Type: CAZyme
Location: 1311360 - 1312352 (-)
Type: CAZyme
Location: 1311360 - 1312352 (-)
Gene ID: A38_contig_425_1189
Type: CAZyme
Location: 1312440 - 1313381 (-)
Type: CAZyme
Location: 1312440 - 1313381 (-)
Gene ID: A38_contig_425_1190
Type: CAZyme
Location: 1313432 - 1314286 (-)
Type: CAZyme
Location: 1313432 - 1314286 (-)
Gene ID: A38_contig_425_1191
Type: CAZyme
Location: 1314264 - 1315490 (-)
Type: CAZyme
Location: 1314264 - 1315490 (-)
Gene ID: A38_contig_425_1192
Type: CAZyme
Location: 1315581 - 1316726 (-)
Type: CAZyme
Location: 1315581 - 1316726 (-)
Gene ID: A38_contig_425_1193
Type: TC
Location: 1316806 - 1318257 (-)
Type: TC
Location: 1316806 - 1318257 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_D
Species
Dorea_D hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A38_contig_425_1190 | vegan > omnivore | 1.52846 | 0.03778 |
| A38_contig_425_1191 | vegan > omnivore | 1.21132 | 0.03778 |