Cluster: A38.bin_27_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A38.bin_27
- CGC Family ID: CGCFAM_00673
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A38_contig_425 | A38_contig_425_1109 | 1223503 | 1224084 | - | 2.A.107.1.2 |
| pfam | A38_contig_425 | A38_contig_425_1110 | 1225081 | 1225788 | - | HTH_Tnp_1 | HTH_28 | HTH_28 | HTH_28 |
| CAZyme | A38_contig_425 | A38_contig_425_1111 | 1225871 | 1226887 | - | GT2 |
Gene ID: A38_contig_425_1109
Type: TC
Location: 1223503 - 1224084 (-)
Type: TC
Location: 1223503 - 1224084 (-)
Gene ID: A38_contig_425_1110
Type: pfam
Location: 1225081 - 1225788 (-)
Type: pfam
Location: 1225081 - 1225788 (-)
Gene ID: A38_contig_425_1111
Type: CAZyme
Location: 1225871 - 1226887 (-)
Type: CAZyme
Location: 1225871 - 1226887 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_D
Species
Dorea_D hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A38_contig_425_1110 | vegetarian > vegan | 1.13150 | 0.02934 |