Cluster: A37.bin_30_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: A37.bin_30
- CGC Family ID: CGCFAM_01911
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A37_contig_2242 | A37_contig_2242_111 | 137606 | 139027 | + | 2.A.1.1.3 |
| CAZyme | A37_contig_2242 | A37_contig_2242_112 | 139236 | 141395 | - | GH3 |
| NULL(UNKNOWN) | A37_contig_2242 | A37_contig_2242_113 | 141593 | 141724 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A37_contig_2242 | A37_contig_2242_114 | 141979 | 145428 | - | GH38 |
| CAZyme | A37_contig_2242 | A37_contig_2242_115 | 146138 | 148165 | + | GH38 |
Gene ID: A37_contig_2242_111
Type: TC
Location: 137606 - 139027 (+)
Type: TC
Location: 137606 - 139027 (+)
Gene ID: A37_contig_2242_112
Type: CAZyme
Location: 139236 - 141395 (-)
Type: CAZyme
Location: 139236 - 141395 (-)
Gene ID: A37_contig_2242_113
Type:
Location: 141593 - 141724 (-)
Type:
Location: 141593 - 141724 (-)
Gene ID: A37_contig_2242_114
Type: CAZyme
Location: 141979 - 145428 (-)
Type: CAZyme
Location: 141979 - 145428 (-)
Gene ID: A37_contig_2242_115
Type: CAZyme
Location: 146138 - 148165 (+)
Type: CAZyme
Location: 146138 - 148165 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp944320685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A37_contig_2242_111 | vegan > omnivore | 1.33511 | 0.01287 |