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Cluster: A37.bin_30_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A37_contig_2242 A37_contig_2242_85 107412 108467 - GH5_7
CAZyme A37_contig_2242 A37_contig_2242_86 108471 109901 - GH140
TF A37_contig_2242 A37_contig_2242_87 110157 111161 + GntR
pfam A37_contig_2242 A37_contig_2242_88 111286 112302 - Gp_dh_N | Gp_dh_C
TC A37_contig_2242 A37_contig_2242_89 112632 113426 - 3.A.1.27.5
TC A37_contig_2242 A37_contig_2242_90 113431 114165 - 3.A.1.27.2
pfam A37_contig_2242 A37_contig_2242_91 114421 117558 - Eco57I | Type_ISP_C
CAZyme A37_contig_2242 A37_contig_2242_92 117572 118576 - GH43_18
Gene ID: A37_contig_2242_85
Type: CAZyme
Location: 107412 - 108467 (-)
Gene ID: A37_contig_2242_86
Type: CAZyme
Location: 108471 - 109901 (-)
Gene ID: A37_contig_2242_87
Type: TF
Location: 110157 - 111161 (+)
Gene ID: A37_contig_2242_88
Type: pfam
Location: 111286 - 112302 (-)
Gene ID: A37_contig_2242_89
Type: TC
Location: 112632 - 113426 (-)
Gene ID: A37_contig_2242_90
Type: TC
Location: 113431 - 114165 (-)
Gene ID: A37_contig_2242_91
Type: pfam
Location: 114421 - 117558 (-)
Gene ID: A37_contig_2242_92
Type: CAZyme
Location: 117572 - 118576 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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