Cluster: A37.bin_30_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A37.bin_30
- CGC Family ID: CGCFAM_04387
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A37_contig_700 | A37_contig_700_258 | 280942 | 282228 | - | 9.A.40.2.4 |
| pfam | A37_contig_700 | A37_contig_700_259 | 282451 | 284229 | + | tRNA-synt_1d | Arg_tRNA_synt_N | DALR_1 |
| CAZyme | A37_contig_700 | A37_contig_700_260 | 284358 | 285371 | + | GH43_3 |
| pfam | A37_contig_700 | A37_contig_700_261 | 285553 | 285987 | - | DUF5606 | DUF6852 |
| TC | A37_contig_700 | A37_contig_700_262 | 286034 | 287026 | - | 1.A.23.2.1 |
Gene ID: A37_contig_700_258
Type: TC
Location: 280942 - 282228 (-)
Type: TC
Location: 280942 - 282228 (-)
Gene ID: A37_contig_700_259
Type: pfam
Location: 282451 - 284229 (+)
Type: pfam
Location: 282451 - 284229 (+)
Gene ID: A37_contig_700_260
Type: CAZyme
Location: 284358 - 285371 (+)
Type: CAZyme
Location: 284358 - 285371 (+)
Gene ID: A37_contig_700_261
Type: pfam
Location: 285553 - 285987 (-)
Type: pfam
Location: 285553 - 285987 (-)
Gene ID: A37_contig_700_262
Type: TC
Location: 286034 - 287026 (-)
Type: TC
Location: 286034 - 287026 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp944320685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A37_contig_700_261 | vegetarian > vegan | 1.68826 | 0.00566 |