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Cluster: A37.bin_30_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A37_contig_700 A37_contig_700_48 41880 45062 - 1.B.14.6.3
TC A37_contig_700 A37_contig_700_49 45493 45960 + 1.A.22.1.1
pfam A37_contig_700 A37_contig_700_50 46112 46585 - C_GCAxxG_C_C
CAZyme A37_contig_700 A37_contig_700_51 46774 47877 + GH43_24
pfam A37_contig_700 A37_contig_700_52 47905 50880 + PPDK_N
peptidase A37_contig_700 A37_contig_700_53 50946 51851 + G05.UPW
CAZyme A37_contig_700 A37_contig_700_54 51871 52971 - GH93
Gene ID: A37_contig_700_48
Type: TC
Location: 41880 - 45062 (-)
Gene ID: A37_contig_700_49
Type: TC
Location: 45493 - 45960 (+)
Gene ID: A37_contig_700_50
Type: pfam
Location: 46112 - 46585 (-)
Gene ID: A37_contig_700_51
Type: CAZyme
Location: 46774 - 47877 (+)
Gene ID: A37_contig_700_52
Type: pfam
Location: 47905 - 50880 (+)
Gene ID: A37_contig_700_53
Type: peptidase
Location: 50946 - 51851 (+)
Gene ID: A37_contig_700_54
Type: CAZyme
Location: 51871 - 52971 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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