Cluster: A37.bin_30_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: A37.bin_30
- CGC Family ID: CGCFAM_06733
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A37_contig_94 | A37_contig_94_388 | 456890 | 458089 | + | 1.A.23.4.5 |
| pfam | A37_contig_94 | A37_contig_94_389 | 458161 | 458946 | - | BSP |
| CAZyme | A37_contig_94 | A37_contig_94_390 | 458978 | 461344 | - | GH92 |
| CAZyme | A37_contig_94 | A37_contig_94_391 | 461524 | 463143 | - | CBM91 | GH43_10 |
| NULL(UNKNOWN) | A37_contig_94 | A37_contig_94_392 | 464007 | 464207 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A37_contig_94 | A37_contig_94_393 | 464425 | 466161 | - | CBM32 | GH43_28 |
Gene ID: A37_contig_94_388
Type: TC
Location: 456890 - 458089 (+)
Type: TC
Location: 456890 - 458089 (+)
Gene ID: A37_contig_94_389
Type: pfam
Location: 458161 - 458946 (-)
Type: pfam
Location: 458161 - 458946 (-)
Gene ID: A37_contig_94_390
Type: CAZyme
Location: 458978 - 461344 (-)
Type: CAZyme
Location: 458978 - 461344 (-)
Gene ID: A37_contig_94_391
Type: CAZyme
Location: 461524 - 463143 (-)
Type: CAZyme
Location: 461524 - 463143 (-)
Gene ID: A37_contig_94_392
Type:
Location: 464007 - 464207 (+)
Type:
Location: 464007 - 464207 (+)
Gene ID: A37_contig_94_393
Type: CAZyme
Location: 464425 - 466161 (-)
Type: CAZyme
Location: 464425 - 466161 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp944320685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A37_contig_94_392 | vegan > omnivore | 5.88679 | 0.02630 |