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Cluster: A37.bin_30_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A37_contig_189 A37_contig_189_38 36995 40252 + GH146
NULL(UNKNOWN) A37_contig_189 A37_contig_189_39 40346 40726 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A37_contig_189 A37_contig_189_40 40795 43002 - GH182
TF A37_contig_189 A37_contig_189_41 43330 44250 + HTH_AraC
STP A37_contig_189 A37_contig_189_42 44354 45718 - PALP
CAZyme A37_contig_189 A37_contig_189_43 45973 47385 - GH109
CAZyme A37_contig_189 A37_contig_189_44 47399 49051 - GH20
TF A37_contig_189 A37_contig_189_45 49305 50108 + 0040266
NULL(UNKNOWN) A37_contig_189 A37_contig_189_46 50116 51885 + NULL(UNKNOWN)
[View Structural Homologs]
TC A37_contig_189 A37_contig_189_47 51929 55186 + 9.A.25.1.1
Gene ID: A37_contig_189_38
Type: CAZyme
Location: 36995 - 40252 (+)
Gene ID: A37_contig_189_39
Type:
Location: 40346 - 40726 (+)
Gene ID: A37_contig_189_40
Type: CAZyme
Location: 40795 - 43002 (-)
Gene ID: A37_contig_189_41
Type: TF
Location: 43330 - 44250 (+)
Gene ID: A37_contig_189_42
Type: STP
Location: 44354 - 45718 (-)
Gene ID: A37_contig_189_43
Type: CAZyme
Location: 45973 - 47385 (-)
Gene ID: A37_contig_189_44
Type: CAZyme
Location: 47399 - 49051 (-)
Gene ID: A37_contig_189_45
Type: TF
Location: 49305 - 50108 (+)
Gene ID: A37_contig_189_46
Type:
Location: 50116 - 51885 (+)
Gene ID: A37_contig_189_47
Type: TC
Location: 51929 - 55186 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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