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Cluster: A37.bin_19_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A37_contig_541_corr_2_np12 A37_contig_541_corr_2_np12_389 432387 433775 - CE4
NULL(UNKNOWN) A37_contig_541_corr_2_np12 A37_contig_541_corr_2_np12_390 433869 434060 + NULL(UNKNOWN)
[View Structural Homologs]
pfam A37_contig_541_corr_2_np12 A37_contig_541_corr_2_np12_391 434335 437460 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | DUF5915
TC A37_contig_541_corr_2_np12 A37_contig_541_corr_2_np12_392 437707 438387 + 3.A.1.3.17
TC A37_contig_541_corr_2_np12 A37_contig_541_corr_2_np12_393 438377 439123 + 3.A.1.3.25
pfam A37_contig_541_corr_2_np12 A37_contig_541_corr_2_np12_394 439202 440233 + OCD_Mu_crystall
TC A37_contig_541_corr_2_np12 A37_contig_541_corr_2_np12_395 440268 441071 + 3.A.1.3.27
STP A37_contig_541_corr_2_np12 A37_contig_541_corr_2_np12_396 441081 442271 + Aminotran_1_2
CAZyme A37_contig_541_corr_2_np12 A37_contig_541_corr_2_np12_397 442585 443412 - CE4
Gene ID: A37_contig_541_corr_2_np12_389
Type: CAZyme
Location: 432387 - 433775 (-)
Gene ID: A37_contig_541_corr_2_np12_390
Type:
Location: 433869 - 434060 (+)
Gene ID: A37_contig_541_corr_2_np12_391
Type: pfam
Location: 434335 - 437460 (+)
Gene ID: A37_contig_541_corr_2_np12_392
Type: TC
Location: 437707 - 438387 (+)
Gene ID: A37_contig_541_corr_2_np12_393
Type: TC
Location: 438377 - 439123 (+)
Gene ID: A37_contig_541_corr_2_np12_394
Type: pfam
Location: 439202 - 440233 (+)
Gene ID: A37_contig_541_corr_2_np12_395
Type: TC
Location: 440268 - 441071 (+)
Gene ID: A37_contig_541_corr_2_np12_396
Type: STP
Location: 441081 - 442271 (+)
Gene ID: A37_contig_541_corr_2_np12_397
Type: CAZyme
Location: 442585 - 443412 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A37_contig_541_corr_2_np12_392 vegetarian > vegan 1.30965 0.00038
A37_contig_541_corr_2_np12_393 vegetarian > vegan 1.08487 0.00038
A37_contig_541_corr_2_np12_394 vegetarian > vegan 2.63885 0.00038
A37_contig_541_corr_2_np12_397 vegetarian > vegan 1.43660 0.00038

🧭 Explore Read Mapping of CGC

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